| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKNGKVVVPKVSGNQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHPGADDRVPFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRSGPDGHPLPAAPPPSLLYVPPPPASPLAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9490 | |
| 2 | L | A | 1.9702 | |
| 3 | P | A | 0.6611 | |
| 4 | P | A | 0.3720 | |
| 5 | T | A | 0.1262 | |
| 6 | T | A | 0.1358 | |
| 7 | P | A | 0.1820 | |
| 8 | V | A | 1.2402 | |
| 9 | A | A | 0.0786 | |
| 10 | K | A | -1.0659 | |
| 11 | V | A | -0.2300 | |
| 12 | Q | A | -1.4529 | |
| 13 | S | A | -1.5684 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4206 | |
| 16 | E | A | -2.4411 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4592 | |
| 20 | P | A | 0.1081 | |
| 21 | T | A | 0.1158 | |
| 22 | S | A | -0.1721 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1091 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1758 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7933 | |
| 31 | R | A | -2.6666 | |
| 32 | L | A | -0.7979 | |
| 33 | L | A | 1.1239 | |
| 34 | T | A | 1.3509 | |
| 35 | V | A | 1.8524 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2429 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6055 | |
| 40 | K | A | -1.7186 | |
| 41 | D | A | -0.7121 | |
| 42 | I | A | 1.0125 | |
| 43 | I | A | 1.2854 | |
| 44 | K | A | -1.0486 | |
| 45 | N | A | -1.8692 | |
| 46 | G | A | -1.1654 | |
| 47 | K | A | -0.8519 | |
| 48 | V | A | 1.7990 | |
| 49 | V | A | 2.1486 | |
| 50 | V | A | 1.3802 | |
| 51 | P | A | 0.5759 | |
| 52 | K | A | -0.5745 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | N | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1148 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4627 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2703 | |
| 70 | K | A | -1.8133 | |
| 71 | F | A | -0.6685 | |
| 72 | A | A | -0.5902 | |
| 73 | L | A | -0.8800 | |
| 74 | P | A | -1.2654 | |
| 75 | Q | A | -2.4786 | |
| 76 | K | A | -3.0972 | |
| 77 | D | A | -2.9918 | |
| 78 | F | A | -1.6376 | |
| 79 | Y | A | -1.9242 | |
| 80 | D | A | -2.7723 | |
| 81 | P | A | -2.3558 | |
| 82 | E | A | -3.0741 | |
| 83 | K | A | -3.4455 | |
| 84 | E | A | -2.5040 | |
| 85 | R | A | -1.3161 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6496 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9595 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3470 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7620 | |
| 99 | G | A | -0.5506 | |
| 100 | P | A | -0.4375 | |
| 101 | L | A | -0.0612 | |
| 102 | G | A | -0.4480 | |
| 103 | K | A | -1.1073 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5454 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0969 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2474 | |
| 110 | L | A | 0.1534 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1954 | |
| 113 | K | A | -0.5267 | |
| 114 | L | A | -0.9374 | |
| 115 | G | A | -0.8992 | |
| 116 | D | A | -1.2835 | |
| 117 | T | A | -1.1850 | |
| 118 | E | A | -2.6562 | |
| 119 | N | A | -2.3693 | |
| 120 | P | A | -1.5581 | |
| 121 | T | A | -0.8124 | |
| 122 | A | A | -0.4715 | |
| 123 | P | A | -0.3126 | |
| 124 | L | A | -0.4382 | |
| 125 | H | A | -0.8887 | |
| 126 | P | A | -1.3586 | |
| 127 | G | A | -1.5425 | |
| 128 | A | A | -1.2894 | |
| 129 | D | A | -2.2641 | |
| 130 | D | A | -1.8129 | |
| 131 | R | A | -1.2436 | |
| 132 | V | A | -0.0295 | |
| 133 | P | A | 0.0872 | |
| 134 | F | A | 0.1248 | |
| 135 | S | A | -0.1360 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7804 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2804 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5577 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2274 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1299 | |
| 157 | D | A | 0.2890 | |
| 158 | L | A | 0.7725 | |
| 159 | A | A | 0.1666 | |
| 160 | E | A | -1.4488 | |
| 161 | P | A | -0.2069 | |
| 162 | C | A | 0.1921 | |
| 163 | P | A | -0.1567 | |
| 164 | G | A | -0.0585 | |
| 165 | L | A | 0.6250 | |
| 166 | P | A | -0.0977 | |
| 167 | P | A | -0.3330 | |
| 168 | G | A | -0.4119 | |
| 169 | A | A | -0.0097 | |
| 170 | C | A | 0.6749 | |
| 171 | P | A | 0.5164 | |
| 172 | P | A | 0.6810 | |
| 173 | I | A | 1.9710 | |
| 174 | Q | A | 0.8356 | |
| 175 | L | A | 1.4906 | |
| 176 | V | A | 0.8410 | |
| 177 | N | A | -0.3151 | |
| 178 | S | A | 0.0360 | |
| 179 | V | A | 0.4400 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3773 | |
| 182 | D | A | 0.0868 | |
| 183 | G | A | -0.1625 | |
| 184 | D | A | -0.5643 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1343 | |
| 190 | F | A | 0.0593 | |
| 191 | G | A | -0.1022 | |
| 192 | N | A | -0.2744 | |
| 193 | M | A | -0.1505 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4446 | |
| 197 | E | A | -2.6907 | |
| 198 | L | A | -1.2690 | |
| 199 | Q | A | -2.5754 | |
| 200 | Q | A | -3.3420 | |
| 201 | D | A | -3.5955 | |
| 202 | R | A | -3.3560 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1605 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3746 | |
| 211 | S | A | -1.9109 | |
| 212 | T | A | -1.4810 | |
| 213 | R | A | -2.1604 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1756 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3214 | |
| 220 | L | A | 0.5404 | |
| 221 | K | A | -1.2346 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9404 | |
| 224 | N | A | -1.6681 | |
| 225 | E | A | -1.2981 | |
| 226 | A | A | -0.6312 | |
| 227 | Y | A | -0.4102 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7029 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1376 | |
| 234 | F | A | 0.0373 | |
| 235 | G | A | -0.9271 | |
| 236 | R | A | -2.6913 | |
| 237 | R | A | -2.9854 | |
| 238 | E | A | -2.1751 | |
| 239 | Q | A | -0.1911 | |
| 240 | V | A | 1.4670 | |
| 241 | Y | A | 1.1900 | |
| 242 | A | A | 0.1176 | |
| 243 | R | A | -1.4163 | |
| 244 | H | A | -1.2278 | |
| 245 | F | A | -0.2209 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7735 | |
| 249 | S | A | -1.2082 | |
| 250 | G | A | -1.0963 | |
| 251 | P | A | -1.0562 | |
| 252 | D | A | -1.4000 | |
| 253 | G | A | -1.2967 | |
| 254 | H | A | -1.4500 | |
| 255 | P | A | -0.9287 | |
| 256 | L | A | 0.5041 | |
| 257 | P | A | 0.1185 | |
| 258 | A | A | 0.3352 | |
| 259 | A | A | 0.8493 | |
| 260 | P | A | -0.0183 | |
| 261 | P | A | 0.0515 | |
| 262 | P | A | 0.4388 | |
| 263 | S | A | 1.4013 | |
| 264 | L | A | 2.5274 | |
| 265 | L | A | 2.8322 | |
| 266 | Y | A | 2.2883 | |
| 267 | V | A | 2.2372 | |
| 268 | P | A | 1.0903 | |
| 269 | P | A | 0.6277 | |
| 270 | P | A | -0.0854 | |
| 271 | P | A | -0.0527 | |
| 272 | A | A | -0.0540 | |
| 273 | S | A | 0.3203 | |
| 274 | P | A | 0.3918 | |
| 275 | L | A | 1.3148 | |
| 276 | A | A | 1.1360 | |
| 277 | V | A | 1.9487 | |
| 278 | P | A | 1.0169 | |
| 279 | P | A | 0.0753 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5078 | |
| 282 | D | A | -1.0388 | |
| 283 | Y | A | 0.8148 | |
| 284 | F | A | 0.6919 | |
| 285 | G | A | 0.0527 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8562 | |
| 291 | L | A | 1.5429 | |
| 292 | V | A | 0.5227 | |
| 293 | S | A | -0.1659 | |
| 294 | S | A | -0.9693 | |
| 295 | D | A | -1.8452 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1505 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6454 | |
| 301 | R | A | -1.8669 | |
| 302 | P | A | -0.9575 | |
| 303 | F | A | -0.1749 | |
| 304 | W | A | -0.5093 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0813 | |
| 307 | R | A | -2.9238 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7819 | |
| 310 | G | A | -1.4239 | |
| 311 | N | A | -1.3666 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9011 | |
| 319 | N | A | -0.8832 | |
| 320 | E | A | -1.0496 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4896 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.3498 | |
| 333 | N | A | 0.2810 | |
| 334 | F | A | 1.3795 | |
| 335 | T | A | 0.7274 | |
| 336 | I | A | 0.4163 | |
| 337 | S | A | -0.9390 | |
| 338 | Q | A | -1.6819 | |
| 339 | Q | A | -1.2129 | |
| 340 | L | A | 0.7013 | |
| 341 | C | A | 0.3017 | |
| 342 | T | A | -0.4864 | |
| 343 | P | A | -0.9813 | |
| 344 | E | A | -2.3503 | |
| 345 | E | A | -2.6135 | |
| 346 | N | A | -1.5337 | |
| 347 | V | A | 0.4308 | |
| 348 | Y | A | 0.8779 | |
| 349 | D | A | -0.1168 | |
| 350 | P | A | -0.3480 | |
| 351 | S | A | -0.2874 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7145 | |
| 354 | K | A | -1.7262 | |
| 355 | N | A | -1.7272 | |
| 356 | Y | A | -0.1066 | |
| 357 | L | A | 0.5561 | |
| 358 | R | A | 0.8326 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1610 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.1798 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9591 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6846 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2760 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3337 | |
| 376 | L | A | -1.7636 | |
| 377 | D | A | -2.0483 | |
| 378 | P | A | -1.0711 | |
| 379 | G | A | -1.0305 | |
| 380 | V | A | -0.9417 | |
| 381 | L | A | -0.5525 | |
| 382 | A | A | -0.6701 | |
| 383 | H | A | -0.8284 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4151 | |
| 386 | T | A | -0.5630 | |
| 387 | M | A | -0.3117 | |
| 388 | N | A | -0.8752 | |
| 389 | P | A | -1.2727 | |
| 390 | T | A | -1.5231 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5360 | |
| 393 | E | A | -2.9128 | |
| 394 | N | A | -2.6206 | |
| 395 | W | A | -1.5293 | |
| 396 | N | A | -1.2361 | |
| 397 | L | A | -0.2374 | |
| 398 | G | A | 0.5192 | |
| 399 | F | A | 2.4106 | |
| 400 | V | A | 1.8363 | |
| 401 | P | A | 0.0405 | |
| 402 | P | A | -1.9210 | |
| 403 | K | A | -3.3873 | |
| 404 | E | A | -3.8354 | |
| 405 | R | A | -4.0817 | |
| 406 | E | A | -3.8339 | |
| 407 | D | A | -2.8720 | |
| 408 | P | A | -1.7670 | |
| 409 | Y | A | -0.9829 | |
| 410 | K | A | -2.0926 | |
| 411 | G | A | -0.6368 | |
| 412 | L | A | 0.6653 | |
| 413 | I | A | 1.5892 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3705 | |
| 416 | E | A | -1.6181 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8268 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8816 | |
| 421 | E | A | -2.4827 | |
| 422 | R | A | -2.0436 | |
| 423 | F | A | -1.0068 | |
| 424 | S | A | -1.3144 | |
| 425 | Q | A | -1.8426 | |
| 426 | D | A | -2.8938 | |
| 427 | L | A | -1.9989 | |
| 428 | D | A | -2.7806 | |
| 429 | Q | A | -2.6174 | |
| 430 | F | A | -1.4620 | |
| 431 | A | A | -0.9175 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6231 | |
| 435 | K | A | -0.7578 | |
| 436 | F | A | 0.1296 | |
| 437 | L | A | 1.0123 | |
| 438 | Y | A | 0.8117 | |
| 439 | Q | A | -0.2719 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine