Project name: query_structure

Status: done

Started: 2026-03-17 01:18:38
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDIRNTAHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPKIGLPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:20)
Show buried residues

Minimal score value
-2.7815
Maximal score value
1.6241
Average score
-0.6897
Total score value
-62.7654

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.0402
2 S A -0.0646
3 D A -1.2561
4 V A 0.0000
5 P A 0.0000
6 R A -2.5386
7 D A -2.7815
8 L A 0.0000
9 E A -1.9381
10 V A 0.0815
11 V A 1.5380
12 A A 0.8976
13 A A 0.3026
14 T A -0.5266
15 P A -1.1270
16 T A -0.9965
17 S A -0.5284
18 L A 0.0000
19 L A 0.7482
20 I A 0.0000
21 S A -0.8077
22 W A 0.0000
23 D A -2.3522
24 I A -2.0227
25 R A -2.6555
26 N A -2.3976
27 T A -1.4746
28 A A -1.3709
29 H A -1.3484
30 G A -0.5403
31 Y A 0.1137
32 Y A 0.0000
33 R A -0.5523
34 I A 0.0000
35 T A -0.6784
36 Y A -0.4253
37 G A 0.0000
38 E A -1.6255
39 T A -1.2806
40 G A -1.2552
41 G A -1.3936
42 N A -1.5530
43 S A -0.9246
44 P A -0.4107
45 V A 0.2760
46 Q A -1.2097
47 E A -1.8689
48 F A -0.8226
49 T A -0.2262
50 V A 0.0000
51 P A -0.6861
52 G A 0.0000
53 S A -1.1833
54 K A -1.6482
55 S A -0.9938
56 T A -0.5336
57 A A 0.0000
58 T A 0.2361
59 I A 0.0000
60 S A -0.6576
61 G A -1.0297
62 L A 0.0000
63 K A -2.3880
64 P A -1.6823
65 G A -1.4726
66 V A -1.5090
67 D A -2.1814
68 Y A 0.0000
69 T A -0.7896
70 I A 0.0000
71 T A -0.3456
72 V A 0.0000
73 Y A 0.7358
74 A A 0.5738
75 V A 0.0518
76 T A -0.8322
77 T A -1.1341
78 R A -2.3051
79 P A -1.3751
80 K A -1.4836
81 I A 1.0465
82 G A 0.5790
83 L A 1.6241
84 P A 0.9092
85 I A 0.2627
86 S A -0.4179
87 I A -0.7289
88 N A -1.7414
89 Y A -1.4835
90 R A -2.5651
91 T A -1.6606
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Laboratory of Theory of Biopolymers 2018