Project name: 17.26G7

Status: done

Started: 2026-07-07 08:34:45
Settings
Chain sequence(s) H: EFQLQQSGPELVKPGASVKISCKASGYSFLDYNLNWVKQSNGKSLEWIGGINPKFGTTTYSQTFRGKATLTVDRSSTTAYMQLNGLTSEDSTVFYCAVLDYFDYWGQGTTLTVSS
L: DIVLTQSPASLAVSLGQKATISCKASKKVTFFGSLSALHWYQQKPGQPPKLIYNGAKLESGVSARFSDSGSQNRSPFGSQLSFTLTIDPVEADDAATYYCLQNKEVPYTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-3.4485
Maximal score value
2.0717
Average score
-0.5851
Total score value
-136.9154

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6521
2 F H -0.3182
3 Q H -1.2301
4 L H 0.0000
5 Q H -1.9592
6 Q H -1.2978
7 S H -0.9940
8 G H -0.8374
9 P H -0.2499
11 E H 0.1440
12 L H 1.0057
13 V H -0.0899
14 K H -1.6300
15 P H -1.3378
16 G H -1.2104
17 A H -0.9809
18 S H -1.0609
19 V H 0.0000
20 K H -1.0301
21 I H 0.0000
22 S H -0.5420
23 C H 0.0000
24 K H -1.1637
25 A H 0.0000
26 S H -0.8840
27 G H -0.8246
28 Y H -0.4785
29 S H -0.4641
30 F H 0.0000
35 L H -1.0215
36 D H -2.1044
37 Y H -1.5352
38 N H -1.6457
39 L H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H 0.0000
45 S H -1.3613
46 N H -1.8376
47 G H -1.6534
48 K H -1.9152
49 S H -1.1504
50 L H 0.0000
51 E H -0.3694
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 G H -0.2502
56 I H 0.0000
57 N H -0.6354
58 P H 0.0000
59 K H -1.0395
62 F H 1.0317
63 G H 0.0454
64 T H 0.0888
65 T H 0.0676
66 T H -0.0838
67 Y H -0.3573
68 S H 0.0000
69 Q H -1.8910
70 T H -1.2913
71 F H 0.0000
72 R H -2.5436
74 G H -1.7924
75 K H -1.5843
76 A H 0.0000
77 T H -0.7368
78 L H 0.0000
79 T H -0.2503
80 V H -0.3426
81 D H -1.2299
82 R H -1.8253
83 S H -1.0581
84 S H -0.8430
85 T H -0.8247
86 T H 0.0000
87 A H 0.0000
88 Y H -0.0072
89 M H 0.0000
90 Q H -0.8322
91 L H 0.0000
92 N H -1.1004
93 G H -1.1586
94 L H 0.0000
95 T H -1.3500
96 S H -1.4874
97 E H -1.9772
98 D H 0.0000
99 S H -0.7209
100 T H 0.0000
101 V H -0.1861
102 F H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 V H 0.0000
107 L H -0.5084
108 D H -1.2912
114 Y H 0.3138
115 F H -0.0286
116 D H 0.0000
117 Y H 0.2714
118 W H -0.3072
119 G H 0.0000
120 Q H -1.6904
121 G H -0.9470
122 T H 0.0000
123 T H 0.0229
124 L H 0.0000
125 T H -0.0819
126 V H 0.0000
127 S H -0.5430
128 S H -0.7275
1 D L -1.5940
2 I L 0.0000
3 V L 0.7412
4 L L 0.0000
5 T L -0.4080
6 Q L -0.6201
7 S L -0.7189
8 P L -0.3506
9 A L -0.3667
10 S L -0.6727
11 L L -0.5427
12 A L -0.7581
13 V L -0.9792
14 S L -1.4317
15 L L -1.3455
16 G L -1.9471
17 Q L -2.8070
18 K L -3.2365
19 A L 0.0000
20 T L -0.7184
21 I L 0.0000
22 S L -0.3457
23 C L 0.0000
24 K L -1.9077
25 A L 0.0000
26 S L -1.3275
27 K L -2.7951
28 K L -3.0526
29 V L 0.0000
30 T L -0.6490
31 F L 0.9782
32 F L 2.0717
34 G L 0.8337
35 S L 0.7970
36 L L 0.9765
37 S L 0.0000
38 A L -0.5485
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.0271
45 K L -1.1961
46 P L -0.8298
47 G L -1.1051
48 Q L -1.3002
49 P L -0.9689
50 P L 0.0000
51 K L -1.0133
53 L L -0.1503
54 I L 0.0000
55 Y L 0.0000
56 N L -0.2845
57 G L 0.0000
65 A L 0.0000
66 K L -0.7631
67 L L -0.2272
68 E L -0.1655
69 S L 0.5217
70 G L 0.5348
71 V L 1.3813
72 S L 0.0960
74 A L -0.4839
75 R L -1.4245
76 F L -0.9930
77 S L -1.0983
78 D L -2.1705
79 S L -1.5708
80 G L -1.3170
81 S L -1.5869
81A Q L -1.8444
81B N L -1.7438
81C R L 0.0000
81D S L 0.1389
81E P L 0.7252
81F F L 1.5030
82 G L 0.0000
83 S L -0.6359
84 Q L -2.1303
85 L L -1.4854
86 S L -1.0892
87 F L 0.0000
88 T L 0.1711
89 L L 0.0000
90 T L -0.9277
91 I L 0.0000
92 D L -3.4485
93 P L -2.8116
94 V L 0.0000
95 E L -2.8719
96 A L -1.9420
97 D L -2.3432
98 D L -1.9003
99 A L -1.5055
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 N L -0.3084
108 K L -0.4262
109 E L -1.1460
114 V L 0.5027
115 P L -0.0204
116 Y L 0.2361
117 T L 0.1112
118 F L 0.2901
119 G L 0.0000
120 G L -0.5614
121 G L 0.0000
122 T L 0.0000
123 K L -1.3416
124 L L 0.0000
125 E L -1.7733
126 I L -1.4437
127 K L -1.6627
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Laboratory of Theory of Biopolymers 2018