| Chain sequence(s) |
H: EFQLQQSGPELVKPGASVKISCKASGYSFLDYNLNWVKQSNGKSLEWIGGINPKFGTTTYSQTFRGKATLTVDRSSTTAYMQLNGLTSEDSTVFYCAVLDYFDYWGQGTTLTVSS
L: DIVLTQSPASLAVSLGQKATISCKASKKVTFFGSLSALHWYQQKPGQPPKLIYNGAKLESGVSARFSDSGSQNRSPFGSQLSFTLTIDPVEADDAATYYCLQNKEVPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:47)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6521 | |
| 2 | F | H | -0.3182 | |
| 3 | Q | H | -1.2301 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.9592 | |
| 6 | Q | H | -1.2978 | |
| 7 | S | H | -0.9940 | |
| 8 | G | H | -0.8374 | |
| 9 | P | H | -0.2499 | |
| 11 | E | H | 0.1440 | |
| 12 | L | H | 1.0057 | |
| 13 | V | H | -0.0899 | |
| 14 | K | H | -1.6300 | |
| 15 | P | H | -1.3378 | |
| 16 | G | H | -1.2104 | |
| 17 | A | H | -0.9809 | |
| 18 | S | H | -1.0609 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.0301 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.5420 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.1637 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8840 | |
| 27 | G | H | -0.8246 | |
| 28 | Y | H | -0.4785 | |
| 29 | S | H | -0.4641 | |
| 30 | F | H | 0.0000 | |
| 35 | L | H | -1.0215 | |
| 36 | D | H | -2.1044 | |
| 37 | Y | H | -1.5352 | |
| 38 | N | H | -1.6457 | |
| 39 | L | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | S | H | -1.3613 | |
| 46 | N | H | -1.8376 | |
| 47 | G | H | -1.6534 | |
| 48 | K | H | -1.9152 | |
| 49 | S | H | -1.1504 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.3694 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | -0.2502 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.6354 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -1.0395 | |
| 62 | F | H | 1.0317 | |
| 63 | G | H | 0.0454 | |
| 64 | T | H | 0.0888 | |
| 65 | T | H | 0.0676 | |
| 66 | T | H | -0.0838 | |
| 67 | Y | H | -0.3573 | |
| 68 | S | H | 0.0000 | |
| 69 | Q | H | -1.8910 | |
| 70 | T | H | -1.2913 | |
| 71 | F | H | 0.0000 | |
| 72 | R | H | -2.5436 | |
| 74 | G | H | -1.7924 | |
| 75 | K | H | -1.5843 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7368 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.2503 | |
| 80 | V | H | -0.3426 | |
| 81 | D | H | -1.2299 | |
| 82 | R | H | -1.8253 | |
| 83 | S | H | -1.0581 | |
| 84 | S | H | -0.8430 | |
| 85 | T | H | -0.8247 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.0072 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.8322 | |
| 91 | L | H | 0.0000 | |
| 92 | N | H | -1.1004 | |
| 93 | G | H | -1.1586 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.3500 | |
| 96 | S | H | -1.4874 | |
| 97 | E | H | -1.9772 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.7209 | |
| 100 | T | H | 0.0000 | |
| 101 | V | H | -0.1861 | |
| 102 | F | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | V | H | 0.0000 | |
| 107 | L | H | -0.5084 | |
| 108 | D | H | -1.2912 | |
| 114 | Y | H | 0.3138 | |
| 115 | F | H | -0.0286 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.2714 | |
| 118 | W | H | -0.3072 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6904 | |
| 121 | G | H | -0.9470 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.0229 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.0819 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5430 | |
| 128 | S | H | -0.7275 | |
| 1 | D | L | -1.5940 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7412 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.4080 | |
| 6 | Q | L | -0.6201 | |
| 7 | S | L | -0.7189 | |
| 8 | P | L | -0.3506 | |
| 9 | A | L | -0.3667 | |
| 10 | S | L | -0.6727 | |
| 11 | L | L | -0.5427 | |
| 12 | A | L | -0.7581 | |
| 13 | V | L | -0.9792 | |
| 14 | S | L | -1.4317 | |
| 15 | L | L | -1.3455 | |
| 16 | G | L | -1.9471 | |
| 17 | Q | L | -2.8070 | |
| 18 | K | L | -3.2365 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7184 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3457 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.9077 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3275 | |
| 27 | K | L | -2.7951 | |
| 28 | K | L | -3.0526 | |
| 29 | V | L | 0.0000 | |
| 30 | T | L | -0.6490 | |
| 31 | F | L | 0.9782 | |
| 32 | F | L | 2.0717 | |
| 34 | G | L | 0.8337 | |
| 35 | S | L | 0.7970 | |
| 36 | L | L | 0.9765 | |
| 37 | S | L | 0.0000 | |
| 38 | A | L | -0.5485 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0271 | |
| 45 | K | L | -1.1961 | |
| 46 | P | L | -0.8298 | |
| 47 | G | L | -1.1051 | |
| 48 | Q | L | -1.3002 | |
| 49 | P | L | -0.9689 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0133 | |
| 53 | L | L | -0.1503 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | N | L | -0.2845 | |
| 57 | G | L | 0.0000 | |
| 65 | A | L | 0.0000 | |
| 66 | K | L | -0.7631 | |
| 67 | L | L | -0.2272 | |
| 68 | E | L | -0.1655 | |
| 69 | S | L | 0.5217 | |
| 70 | G | L | 0.5348 | |
| 71 | V | L | 1.3813 | |
| 72 | S | L | 0.0960 | |
| 74 | A | L | -0.4839 | |
| 75 | R | L | -1.4245 | |
| 76 | F | L | -0.9930 | |
| 77 | S | L | -1.0983 | |
| 78 | D | L | -2.1705 | |
| 79 | S | L | -1.5708 | |
| 80 | G | L | -1.3170 | |
| 81 | S | L | -1.5869 | |
| 81A | Q | L | -1.8444 | |
| 81B | N | L | -1.7438 | |
| 81C | R | L | 0.0000 | |
| 81D | S | L | 0.1389 | |
| 81E | P | L | 0.7252 | |
| 81F | F | L | 1.5030 | |
| 82 | G | L | 0.0000 | |
| 83 | S | L | -0.6359 | |
| 84 | Q | L | -2.1303 | |
| 85 | L | L | -1.4854 | |
| 86 | S | L | -1.0892 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | 0.1711 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.9277 | |
| 91 | I | L | 0.0000 | |
| 92 | D | L | -3.4485 | |
| 93 | P | L | -2.8116 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.8719 | |
| 96 | A | L | -1.9420 | |
| 97 | D | L | -2.3432 | |
| 98 | D | L | -1.9003 | |
| 99 | A | L | -1.5055 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | -0.3084 | |
| 108 | K | L | -0.4262 | |
| 109 | E | L | -1.1460 | |
| 114 | V | L | 0.5027 | |
| 115 | P | L | -0.0204 | |
| 116 | Y | L | 0.2361 | |
| 117 | T | L | 0.1112 | |
| 118 | F | L | 0.2901 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.5614 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3416 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.7733 | |
| 126 | I | L | -1.4437 | |
| 127 | K | L | -1.6627 |