| Chain sequence(s) |
A: RKEKNCPDGYIYSSNTASGYDCGVWICRRVGSAFCSRTGDYTSPSEFDI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -3.3862 | |
| 2 | K | A | -4.1471 | |
| 3 | E | A | -4.2659 | |
| 4 | K | A | -3.5057 | |
| 5 | N | A | -2.7241 | |
| 6 | C | A | -1.3947 | |
| 7 | P | A | -1.4693 | |
| 8 | D | A | -1.8376 | |
| 9 | G | A | -0.8029 | |
| 10 | Y | A | -0.1116 | |
| 11 | I | A | 0.9540 | |
| 12 | Y | A | 0.6114 | |
| 13 | S | A | 0.8028 | |
| 14 | S | A | 0.5999 | |
| 15 | N | A | -0.7896 | |
| 16 | T | A | -0.5854 | |
| 17 | A | A | -0.7944 | |
| 18 | S | A | -0.7071 | |
| 19 | G | A | -1.1490 | |
| 20 | Y | A | -1.4384 | |
| 21 | D | A | -2.0261 | |
| 22 | C | A | 0.0000 | |
| 23 | G | A | 0.4164 | |
| 24 | V | A | 1.7795 | |
| 25 | W | A | 1.6284 | |
| 26 | I | A | 1.1614 | |
| 27 | C | A | 0.4567 | |
| 28 | R | A | -0.4185 | |
| 29 | R | A | -1.2676 | |
| 30 | V | A | 0.3629 | |
| 31 | G | A | -0.2294 | |
| 32 | S | A | -0.3771 | |
| 33 | A | A | -0.1536 | |
| 34 | F | A | 0.0476 | |
| 35 | C | A | -0.8254 | |
| 36 | S | A | -1.6347 | |
| 37 | R | A | -2.7121 | |
| 38 | T | A | -1.8804 | |
| 39 | G | A | -1.6884 | |
| 40 | D | A | -1.9712 | |
| 41 | Y | A | -0.1737 | |
| 42 | T | A | -0.4173 | |
| 43 | S | A | -0.5607 | |
| 44 | P | A | -0.3745 | |
| 45 | S | A | -1.0900 | |
| 46 | E | A | -1.4031 | |
| 47 | F | A | 0.5918 | |
| 48 | D | A | -0.5490 | |
| 49 | I | A | 1.4178 |