| Chain sequence(s) |
H: PVTLKESGPTLVKPTQTLTLTCTFSGFSLTTTGEGVGWIRQPPGKALEFLAFIYWNDAKRYNPSLQSRLTITKDASKKQVVLTLTNLDPVDTATYYCARTSGWDIEFEYWGQGTLVTVSSGSASAPTLFPLVSCENSSPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMQGTDEHVVCKVQHPNGNKEKDVPLPVVI
L: EIVLTQSPGTLSLSPGERATLSCRASETVSNDKVAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISGLEPEDFVVYYCQQYASSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:46)
[INFO] Main: Simulation completed successfully. (00:04:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | L | -1.5895 | |
| 2 | I | L | -0.5342 | |
| 3 | V | L | 0.7071 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7616 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8736 | |
| 8 | P | L | -0.4434 | |
| 9 | G | L | -0.7640 | |
| 10 | T | L | -0.2956 | |
| 11 | L | L | -0.1168 | |
| 12 | S | L | -0.4165 | |
| 13 | L | L | -0.9712 | |
| 14 | S | L | -1.4770 | |
| 15 | P | L | -1.8506 | |
| 16 | G | L | -2.0974 | |
| 17 | E | L | -2.7238 | |
| 18 | R | L | -2.8994 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5468 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9699 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4433 | |
| 25 | A | L | -1.4017 | |
| 26 | S | L | -1.2686 | |
| 27 | E | L | -2.2903 | |
| 28 | T | L | -1.7532 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -1.3632 | |
| 31 | N | L | -1.7721 | |
| 32 | D | L | -1.5946 | |
| 33 | K | L | -0.9142 | |
| 34 | V | L | 0.0000 | |
| 35 | A | L | 0.0000 | |
| 36 | W | L | 0.0000 | |
| 37 | Y | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | Q | L | 0.0000 | |
| 40 | K | L | -1.3927 | |
| 41 | P | L | -1.2087 | |
| 42 | G | L | -1.1574 | |
| 43 | Q | L | -1.4455 | |
| 44 | A | L | 0.0000 | |
| 45 | P | L | 0.0000 | |
| 46 | R | L | -1.3734 | |
| 47 | L | L | 0.0000 | |
| 48 | L | L | 0.0000 | |
| 49 | I | L | 0.0000 | |
| 50 | Y | L | -0.2940 | |
| 51 | G | L | -0.6023 | |
| 52 | A | L | 0.0000 | |
| 53 | S | L | -0.7912 | |
| 54 | S | L | -0.6783 | |
| 55 | R | L | -1.4257 | |
| 56 | A | L | -0.9570 | |
| 57 | T | L | -0.5723 | |
| 58 | G | L | -0.8797 | |
| 59 | I | L | 0.0000 | |
| 60 | P | L | -1.3662 | |
| 61 | D | L | -2.2526 | |
| 62 | R | L | -1.6832 | |
| 63 | F | L | 0.0000 | |
| 64 | S | L | -0.9912 | |
| 65 | G | L | -0.6027 | |
| 66 | S | L | -0.8420 | |
| 67 | G | L | -1.1378 | |
| 68 | S | L | -1.5447 | |
| 69 | G | L | -1.6088 | |
| 70 | T | L | -2.0373 | |
| 71 | D | L | -2.4991 | |
| 72 | F | L | 0.0000 | |
| 73 | T | L | -0.8587 | |
| 74 | L | L | 0.0000 | |
| 75 | S | L | -0.6212 | |
| 76 | I | L | 0.0000 | |
| 77 | S | L | -2.1022 | |
| 78 | G | L | -1.9575 | |
| 79 | L | L | 0.0000 | |
| 80 | E | L | -2.4245 | |
| 81 | P | L | -1.6967 | |
| 82 | E | L | -2.3105 | |
| 83 | D | L | 0.0000 | |
| 84 | F | L | -0.6735 | |
| 85 | V | L | 0.0000 | |
| 86 | V | L | -0.2786 | |
| 87 | Y | L | 0.0000 | |
| 88 | Y | L | 0.0000 | |
| 89 | C | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | Q | L | 0.0000 | |
| 92 | Y | L | 0.0000 | |
| 93 | A | L | -0.6871 | |
| 94 | S | L | -0.6440 | |
| 95 | S | L | 0.0000 | |
| 96 | P | L | -0.7689 | |
| 97 | R | L | 0.0000 | |
| 98 | T | L | -0.1364 | |
| 99 | F | L | 0.0575 | |
| 100 | G | L | 0.0000 | |
| 101 | Q | L | -1.6873 | |
| 102 | G | L | -1.0176 | |
| 103 | T | L | 0.0000 | |
| 104 | K | L | -0.5373 | |
| 105 | V | L | 0.0000 | |
| 106 | E | L | 0.0000 | |
| 107 | I | L | -0.5151 | |
| 108 | K | L | -1.4318 | |
| 109 | R | L | -1.0336 | |
| 110 | T | L | -0.1502 | |
| 111 | V | L | 0.3403 | |
| 112 | A | L | 0.0474 | |
| 113 | A | L | -0.1040 | |
| 114 | P | L | 0.0000 | |
| 115 | S | L | -0.2246 | |
| 116 | V | L | 0.0000 | |
| 117 | F | L | 0.0000 | |
| 118 | I | L | 0.0000 | |
| 119 | F | L | 0.0000 | |
| 120 | P | L | -0.4118 | |
| 121 | P | L | 0.0000 | |
| 122 | S | L | -1.3776 | |
| 123 | D | L | -2.7892 | |
| 124 | E | L | -2.5745 | |
| 125 | Q | L | 0.0000 | |
| 126 | L | L | -2.1872 | |
| 127 | K | L | -2.7028 | |
| 128 | S | L | -1.6901 | |
| 129 | G | L | -1.1927 | |
| 130 | T | L | -0.9628 | |
| 131 | A | L | 0.0000 | |
| 132 | S | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | V | L | 0.0000 | |
| 135 | C | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | L | L | 0.0000 | |
| 138 | N | L | 0.0000 | |
| 139 | N | L | -0.6565 | |
| 140 | F | L | 0.0000 | |
| 141 | Y | L | 0.0000 | |
| 142 | P | L | -1.3080 | |
| 143 | R | L | -2.0997 | |
| 144 | E | L | -2.7719 | |
| 145 | A | L | -2.1531 | |
| 146 | K | L | -2.4249 | |
| 147 | V | L | -1.3912 | |
| 148 | Q | L | -0.9569 | |
| 149 | W | L | 0.0000 | |
| 150 | K | L | -0.6639 | |
| 151 | V | L | 0.0000 | |
| 152 | D | L | -1.8486 | |
| 153 | N | L | -1.5076 | |
| 154 | A | L | -0.3160 | |
| 155 | L | L | 0.6195 | |
| 156 | Q | L | -0.2080 | |
| 157 | S | L | -0.5260 | |
| 158 | G | L | -0.8542 | |
| 159 | N | L | -0.7335 | |
| 160 | S | L | -1.1199 | |
| 161 | Q | L | -1.3313 | |
| 162 | E | L | -1.8459 | |
| 163 | S | L | 0.0000 | |
| 164 | V | L | -0.4834 | |
| 165 | T | L | -1.0428 | |
| 166 | E | L | -2.1051 | |
| 167 | Q | L | -1.6839 | |
| 168 | D | L | -1.8910 | |
| 169 | S | L | -1.7341 | |
| 170 | K | L | -2.1970 | |
| 171 | D | L | -1.6152 | |
| 172 | S | L | -1.5940 | |
| 173 | T | L | 0.0000 | |
| 174 | Y | L | 0.0000 | |
| 175 | S | L | 0.0000 | |
| 176 | L | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | S | L | 0.0000 | |
| 179 | T | L | 0.0000 | |
| 180 | L | L | 0.0000 | |
| 181 | T | L | -0.3374 | |
| 182 | L | L | -0.6114 | |
| 183 | S | L | -1.2463 | |
| 184 | K | L | -2.0084 | |
| 185 | A | L | -1.8288 | |
| 186 | D | L | -2.5380 | |
| 187 | Y | L | 0.0000 | |
| 188 | E | L | -3.3676 | |
| 189 | K | L | -3.5939 | |
| 190 | H | L | -3.0013 | |
| 191 | K | L | -3.3642 | |
| 192 | V | L | -1.7781 | |
| 193 | Y | L | 0.0000 | |
| 194 | A | L | -0.6389 | |
| 195 | C | L | 0.0000 | |
| 196 | E | L | -0.9555 | |
| 197 | V | L | 0.0000 | |
| 198 | T | L | -1.3407 | |
| 199 | H | L | 0.0000 | |
| 200 | Q | L | -1.6929 | |
| 201 | G | L | -0.4667 | |
| 202 | L | L | -0.2620 | |
| 203 | S | L | -0.4642 | |
| 204 | S | L | -0.4517 | |
| 205 | P | L | -0.6270 | |
| 206 | V | L | 0.0146 | |
| 207 | T | L | -0.4185 | |
| 208 | K | L | -0.7106 | |
| 209 | S | L | -0.7976 | |
| 210 | F | L | 0.0000 | |
| 211 | N | L | -2.1156 | |
| 212 | R | L | -3.0064 | |
| 213 | G | L | -2.3737 | |
| 214 | E | L | -2.3299 | |
| 215 | C | L | -0.7823 | |
| 1 | P | H | -0.1811 | |
| 2 | V | H | 0.0079 | |
| 3 | T | H | -0.5545 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -2.1092 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7117 | |
| 8 | G | H | -0.2909 | |
| 9 | P | H | -0.1164 | |
| 10 | T | H | 0.0827 | |
| 11 | L | H | -0.1474 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -2.4051 | |
| 14 | P | H | -1.8547 | |
| 15 | T | H | -1.7384 | |
| 16 | Q | H | -1.8992 | |
| 17 | T | H | -1.2209 | |
| 18 | L | H | 0.0000 | |
| 19 | T | H | -0.0778 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.3524 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -1.2411 | |
| 24 | F | H | 0.0000 | |
| 25 | S | H | -0.7184 | |
| 26 | G | H | -0.4708 | |
| 27 | F | H | -0.2102 | |
| 28 | S | H | -0.2648 | |
| 29 | L | H | 0.0000 | |
| 30 | T | H | -0.4443 | |
| 31 | T | H | -0.2584 | |
| 32 | T | H | -0.1151 | |
| 33 | G | H | 0.2317 | |
| 34 | E | H | 0.0000 | |
| 35 | G | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | G | H | 0.0000 | |
| 38 | W | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | R | H | 0.0000 | |
| 41 | Q | H | -0.8651 | |
| 42 | P | H | -0.6270 | |
| 43 | P | H | -1.0030 | |
| 44 | G | H | -1.4855 | |
| 45 | K | H | -2.3687 | |
| 46 | A | H | -1.5415 | |
| 47 | L | H | 0.0000 | |
| 48 | E | H | -1.0867 | |
| 49 | F | H | 0.0000 | |
| 50 | L | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | F | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | Y | H | -1.1968 | |
| 55 | W | H | -1.1233 | |
| 56 | N | H | -2.0608 | |
| 57 | D | H | -2.5946 | |
| 58 | A | H | -2.0419 | |
| 59 | K | H | -2.7678 | |
| 60 | R | H | -2.3137 | |
| 61 | Y | H | -1.2972 | |
| 62 | N | H | -1.0916 | |
| 63 | P | H | -1.1305 | |
| 64 | S | H | -0.6711 | |
| 65 | L | H | 0.0000 | |
| 66 | Q | H | -1.3240 | |
| 67 | S | H | -0.8504 | |
| 68 | R | H | -1.0784 | |
| 69 | L | H | 0.0000 | |
| 70 | T | H | -0.6169 | |
| 71 | I | H | 0.0000 | |
| 72 | T | H | -0.7253 | |
| 73 | K | H | -1.3309 | |
| 74 | D | H | -1.5051 | |
| 75 | A | H | -1.2251 | |
| 76 | S | H | -1.4941 | |
| 77 | K | H | -2.3998 | |
| 78 | K | H | -1.9119 | |
| 79 | Q | H | -1.5603 | |
| 80 | V | H | 0.0000 | |
| 81 | V | H | 0.1428 | |
| 82 | L | H | 0.0000 | |
| 83 | T | H | -0.0461 | |
| 84 | L | H | 0.0000 | |
| 85 | T | H | -1.2238 | |
| 86 | N | H | -2.1715 | |
| 87 | L | H | 0.0000 | |
| 88 | D | H | -1.4955 | |
| 89 | P | H | -0.2519 | |
| 90 | V | H | 1.2639 | |
| 91 | D | H | 0.0000 | |
| 92 | T | H | 0.3411 | |
| 93 | A | H | 0.0000 | |
| 94 | T | H | -0.1047 | |
| 95 | Y | H | 0.0000 | |
| 96 | Y | H | 0.0000 | |
| 97 | C | H | 0.0000 | |
| 98 | A | H | 0.0000 | |
| 99 | R | H | -0.0069 | |
| 100 | T | H | 0.0000 | |
| 101 | S | H | 0.1680 | |
| 102 | G | H | 0.3978 | |
| 103 | W | H | 1.0452 | |
| 104 | D | H | 0.4262 | |
| 105 | I | H | 0.4289 | |
| 106 | E | H | 0.0000 | |
| 107 | F | H | 0.0000 | |
| 108 | E | H | -0.3167 | |
| 109 | Y | H | -0.0917 | |
| 110 | W | H | -0.6052 | |
| 111 | G | H | 0.0000 | |
| 112 | Q | H | -1.7240 | |
| 113 | G | H | -1.0100 | |
| 114 | T | H | -0.3727 | |
| 115 | L | H | 0.2339 | |
| 116 | V | H | 0.0000 | |
| 117 | T | H | 0.0000 | |
| 118 | V | H | 0.0000 | |
| 119 | S | H | -0.9785 | |
| 120 | S | H | -1.3344 | |
| 121 | G | H | -0.9164 | |
| 122 | S | H | -0.6073 | |
| 123 | A | H | -0.5538 | |
| 124 | S | H | -0.6420 | |
| 125 | A | H | -1.2868 | |
| 126 | P | H | 0.0000 | |
| 127 | T | H | -0.8656 | |
| 128 | L | H | 0.0000 | |
| 129 | F | H | 0.0000 | |
| 130 | P | H | 0.0000 | |
| 131 | L | H | 0.0000 | |
| 132 | V | H | 0.4606 | |
| 133 | S | H | 0.0000 | |
| 134 | C | H | -0.3608 | |
| 135 | E | H | -0.9308 | |
| 136 | N | H | -1.5780 | |
| 137 | S | H | -1.1013 | |
| 138 | S | H | -0.9990 | |
| 139 | P | H | -0.8697 | |
| 140 | S | H | -0.7002 | |
| 141 | S | H | -0.5951 | |
| 142 | T | H | -0.7136 | |
| 143 | V | H | 0.0000 | |
| 144 | A | H | 0.0000 | |
| 145 | V | H | 0.0000 | |
| 146 | G | H | 0.0000 | |
| 147 | C | H | 0.0000 | |
| 148 | L | H | 0.0000 | |
| 149 | A | H | 0.0000 | |
| 150 | Q | H | 0.0000 | |
| 151 | D | H | -0.7514 | |
| 152 | F | H | 0.0000 | |
| 153 | L | H | 0.0000 | |
| 154 | P | H | -0.5167 | |
| 155 | D | H | -0.3630 | |
| 156 | S | H | -0.6126 | |
| 157 | I | H | -0.4329 | |
| 158 | T | H | -0.4203 | |
| 159 | F | H | -0.4058 | |
| 160 | S | H | -0.8920 | |
| 161 | W | H | 0.0000 | |
| 162 | K | H | -1.9320 | |
| 163 | Y | H | -2.1672 | |
| 164 | K | H | -2.8954 | |
| 165 | N | H | -2.7319 | |
| 166 | N | H | -2.7032 | |
| 167 | S | H | -2.1695 | |
| 168 | D | H | -2.4035 | |
| 169 | I | H | -0.8620 | |
| 170 | S | H | -0.5142 | |
| 171 | S | H | 0.0000 | |
| 172 | T | H | -0.3522 | |
| 173 | R | H | -0.5466 | |
| 174 | G | H | -0.4859 | |
| 175 | F | H | 0.0000 | |
| 176 | P | H | -0.5883 | |
| 177 | S | H | -0.0400 | |
| 178 | V | H | 0.2005 | |
| 179 | L | H | 0.9132 | |
| 180 | R | H | -0.3495 | |
| 181 | G | H | -0.6842 | |
| 182 | G | H | -0.6096 | |
| 183 | K | H | -0.6162 | |
| 184 | Y | H | -0.0200 | |
| 185 | A | H | 0.0000 | |
| 186 | A | H | 0.0000 | |
| 187 | T | H | 0.0000 | |
| 188 | S | H | 0.0000 | |
| 189 | Q | H | 0.0000 | |
| 190 | V | H | 0.0000 | |
| 191 | L | H | 0.1921 | |
| 192 | L | H | 0.0000 | |
| 193 | P | H | -1.1801 | |
| 194 | S | H | -1.0109 | |
| 195 | K | H | -2.4293 | |
| 196 | D | H | -2.5715 | |
| 197 | V | H | 0.0000 | |
| 198 | M | H | -0.0146 | |
| 199 | Q | H | -1.5325 | |
| 200 | G | H | -1.6718 | |
| 201 | T | H | -1.1690 | |
| 202 | D | H | -2.1222 | |
| 203 | E | H | -2.2746 | |
| 204 | H | H | -1.6246 | |
| 205 | V | H | 0.0000 | |
| 206 | V | H | -1.5717 | |
| 207 | C | H | 0.0000 | |
| 208 | K | H | -2.0930 | |
| 209 | V | H | 0.0000 | |
| 210 | Q | H | -2.3997 | |
| 211 | H | H | 0.0000 | |
| 212 | P | H | -1.4091 | |
| 213 | N | H | -1.8855 | |
| 214 | G | H | -2.1507 | |
| 215 | N | H | -3.0612 | |
| 216 | K | H | -3.1740 | |
| 217 | E | H | -3.4343 | |
| 218 | K | H | -2.2670 | |
| 219 | D | H | -2.1310 | |
| 220 | V | H | 0.0000 | |
| 221 | P | H | -0.6302 | |
| 222 | L | H | -0.0386 | |
| 223 | P | H | 0.9330 | |
| 224 | V | H | 1.7499 | |
| 225 | V | H | 1.6426 | |
| 226 | I | H | 2.0060 |