| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARRLARRGGVKRISALIYEETRGVLKVDVFLKDLEPPIVVRFVRLIPVTDHSNAVMLSENRSLFFLRDIVEFRCHPGSLFGSSRVQYVVNPAVKIVFLNIDPSDFPNWHTAYYFKQYFHFRDDLEVQTPSSYIETLPKAIKRRINALKQLQVYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:57)
[INFO] Main: Simulation completed successfully. (00:02:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2249 | |
| 2 | D | A | -1.5777 | |
| 3 | A | A | -0.9633 | |
| 4 | M | A | -0.4724 | |
| 5 | K | A | -2.1900 | |
| 6 | R | A | -2.2778 | |
| 7 | G | A | -0.5612 | |
| 8 | L | A | 1.3941 | |
| 9 | C | A | 2.0717 | |
| 10 | C | A | 2.8613 | |
| 11 | V | A | 3.2893 | |
| 12 | L | A | 3.2780 | |
| 13 | L | A | 3.4163 | |
| 14 | L | A | 2.8655 | |
| 15 | C | A | 1.9683 | |
| 16 | G | A | 1.3467 | |
| 17 | A | A | 2.0053 | |
| 18 | V | A | 3.4025 | |
| 19 | F | A | 3.2372 | |
| 20 | V | A | 1.3388 | |
| 21 | S | A | 0.0376 | |
| 22 | P | A | -0.6256 | |
| 23 | S | A | -1.0483 | |
| 24 | Q | A | -1.6134 | |
| 25 | E | A | -2.2701 | |
| 26 | I | A | -0.5857 | |
| 27 | H | A | -1.8262 | |
| 28 | A | A | -1.6078 | |
| 29 | R | A | -2.9865 | |
| 30 | R | A | -3.4000 | |
| 31 | L | A | -1.8771 | |
| 32 | A | A | -2.6011 | |
| 33 | R | A | -3.4049 | |
| 34 | R | A | -2.9542 | |
| 35 | G | A | -1.8141 | |
| 36 | G | A | -1.0062 | |
| 37 | V | A | -0.2664 | |
| 38 | K | A | -2.0578 | |
| 39 | R | A | -2.3574 | |
| 40 | I | A | -0.6519 | |
| 41 | S | A | -0.6741 | |
| 42 | A | A | 0.7830 | |
| 43 | L | A | 1.9348 | |
| 44 | I | A | 1.9997 | |
| 45 | Y | A | 0.9428 | |
| 46 | E | A | -1.5462 | |
| 47 | E | A | -2.6384 | |
| 48 | T | A | -2.0612 | |
| 49 | R | A | -2.4519 | |
| 50 | G | A | -1.4760 | |
| 51 | V | A | -0.8037 | |
| 52 | L | A | -0.4788 | |
| 53 | K | A | -0.8884 | |
| 54 | V | A | 0.2462 | |
| 55 | D | A | 0.5402 | |
| 56 | V | A | 1.3298 | |
| 57 | F | A | 1.0389 | |
| 58 | L | A | -0.5401 | |
| 59 | K | A | -2.3198 | |
| 60 | D | A | -3.0362 | |
| 61 | L | A | -1.4977 | |
| 62 | E | A | -2.2833 | |
| 63 | P | A | -1.3563 | |
| 64 | P | A | -0.5692 | |
| 65 | I | A | 1.1221 | |
| 66 | V | A | 1.3877 | |
| 67 | V | A | 1.5858 | |
| 68 | R | A | -0.5540 | |
| 69 | F | A | 0.3016 | |
| 70 | V | A | 0.7248 | |
| 71 | R | A | -0.2905 | |
| 72 | L | A | 1.4364 | |
| 73 | I | A | 1.1773 | |
| 74 | P | A | 0.4790 | |
| 75 | V | A | 0.5081 | |
| 76 | T | A | -0.1329 | |
| 77 | D | A | 0.0000 | |
| 78 | H | A | -0.3512 | |
| 79 | S | A | -0.7447 | |
| 80 | N | A | -0.7728 | |
| 81 | A | A | -0.4724 | |
| 82 | V | A | 0.5374 | |
| 83 | M | A | 0.0924 | |
| 84 | L | A | 0.2660 | |
| 85 | S | A | -0.7855 | |
| 86 | E | A | -2.4011 | |
| 87 | N | A | -2.1377 | |
| 88 | R | A | -1.4421 | |
| 89 | S | A | -0.2697 | |
| 90 | L | A | 1.7947 | |
| 91 | F | A | 1.7268 | |
| 92 | F | A | 2.6967 | |
| 93 | L | A | 1.7921 | |
| 94 | R | A | -0.1406 | |
| 95 | D | A | 0.9028 | |
| 96 | I | A | 1.3476 | |
| 97 | V | A | 0.0000 | |
| 98 | E | A | -0.3950 | |
| 99 | F | A | 0.0000 | |
| 100 | R | A | -1.3156 | |
| 101 | C | A | 0.0000 | |
| 102 | H | A | -1.2126 | |
| 103 | P | A | -0.8258 | |
| 104 | G | A | -0.4665 | |
| 105 | S | A | 0.1351 | |
| 106 | L | A | 1.4938 | |
| 107 | F | A | 0.7773 | |
| 108 | G | A | -0.2738 | |
| 109 | S | A | -1.0285 | |
| 110 | S | A | -1.2642 | |
| 111 | R | A | -2.2358 | |
| 112 | V | A | -1.3271 | |
| 113 | Q | A | -0.8859 | |
| 114 | Y | A | 0.5561 | |
| 115 | V | A | 1.2759 | |
| 116 | V | A | 0.9564 | |
| 117 | N | A | -0.1451 | |
| 118 | P | A | 0.0003 | |
| 119 | A | A | -0.0405 | |
| 120 | V | A | 0.4709 | |
| 121 | K | A | -0.0022 | |
| 122 | I | A | 2.0180 | |
| 123 | V | A | 3.1839 | |
| 124 | F | A | 3.5610 | |
| 125 | L | A | 2.5977 | |
| 126 | N | A | 0.2320 | |
| 127 | I | A | 0.0253 | |
| 128 | D | A | -1.8485 | |
| 129 | P | A | -1.1323 | |
| 130 | S | A | -1.2327 | |
| 131 | D | A | -1.6330 | |
| 132 | F | A | 0.3870 | |
| 133 | P | A | -0.3521 | |
| 134 | N | A | -0.8011 | |
| 135 | W | A | 0.4467 | |
| 136 | H | A | -0.3499 | |
| 137 | T | A | 0.8789 | |
| 138 | A | A | 1.2880 | |
| 139 | Y | A | 1.8231 | |
| 140 | Y | A | 2.0328 | |
| 141 | F | A | 2.4191 | |
| 142 | K | A | -0.0304 | |
| 143 | Q | A | 0.0596 | |
| 144 | Y | A | 1.9952 | |
| 145 | F | A | 2.1234 | |
| 146 | H | A | 0.0847 | |
| 147 | F | A | 0.6529 | |
| 148 | R | A | -2.2538 | |
| 149 | D | A | -3.1437 | |
| 150 | D | A | -2.6246 | |
| 151 | L | A | -0.7361 | |
| 152 | E | A | -1.6105 | |
| 153 | V | A | 0.4234 | |
| 154 | Q | A | -0.8614 | |
| 155 | T | A | -0.1636 | |
| 156 | P | A | -0.2540 | |
| 157 | S | A | -0.4958 | |
| 158 | S | A | -0.2141 | |
| 159 | Y | A | 0.7422 | |
| 160 | I | A | 0.0818 | |
| 161 | E | A | -1.5987 | |
| 162 | T | A | -0.6268 | |
| 163 | L | A | -0.2372 | |
| 164 | P | A | -1.1119 | |
| 165 | K | A | -2.4201 | |
| 166 | A | A | -1.3182 | |
| 167 | I | A | -0.6299 | |
| 168 | K | A | -2.1600 | |
| 169 | R | A | -3.2291 | |
| 170 | R | A | -2.8460 | |
| 171 | I | A | -1.4135 | |
| 172 | N | A | -2.3860 | |
| 173 | A | A | -1.7597 | |
| 174 | L | A | -0.9002 | |
| 175 | K | A | -2.1488 | |
| 176 | Q | A | -1.0789 | |
| 177 | L | A | 0.7748 | |
| 178 | Q | A | -0.0693 | |
| 179 | V | A | 1.8097 | |
| 180 | Y | A | 1.9918 | |
| 181 | P | A | 1.0331 | |
| 182 | Y | A | 1.4100 | |
| 183 | D | A | -0.4271 | |
| 184 | V | A | 0.9087 | |
| 185 | P | A | -0.0746 | |
| 186 | D | A | -0.9486 | |
| 187 | Y | A | 0.6792 | |
| 188 | A | A | 0.1997 |