Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNYWMHWVRQAPGQGLEWIGEINPINGRSNYAEKFQGRVTLTVDTSSSTAYMELSRLRSDDTAVYYCARGTRAMHYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRTSENIYNNLAWYQQKPGKSPKLLIYAATNLADGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWGTPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:21) [INFO] Main: Simulation completed successfully. (00:02:24) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5541 | |
2 | V | H | -1.0632 | |
3 | Q | H | -1.3131 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.7102 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.3390 | |
8 | G | H | -0.3127 | |
9 | A | H | 0.4237 | |
11 | E | H | 0.1745 | |
12 | V | H | 1.0752 | |
13 | K | H | -0.9114 | |
14 | K | H | -2.3357 | |
15 | P | H | -2.5661 | |
16 | G | H | -2.2853 | |
17 | A | H | -1.7700 | |
18 | S | H | -1.8078 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.9513 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.4117 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.7281 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.8808 | |
27 | G | H | -1.1068 | |
28 | Y | H | -0.5985 | |
29 | T | H | -0.3934 | |
30 | F | H | 0.0000 | |
35 | T | H | 0.0469 | |
36 | N | H | -0.6392 | |
37 | Y | H | -0.0021 | |
38 | W | H | -0.0209 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.4991 | |
45 | A | H | -0.9022 | |
46 | P | H | -0.9203 | |
47 | G | H | -1.2197 | |
48 | Q | H | -1.7444 | |
49 | G | H | -1.1540 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8287 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | E | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -0.6166 | |
58 | P | H | 0.0000 | |
59 | I | H | 0.8035 | |
62 | N | H | -1.0733 | |
63 | G | H | -1.3463 | |
64 | R | H | -2.1760 | |
65 | S | H | -1.2669 | |
66 | N | H | -0.9032 | |
67 | Y | H | -0.9886 | |
68 | A | H | 0.0000 | |
69 | E | H | -3.2939 | |
70 | K | H | -2.9913 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.5732 | |
74 | G | H | -1.8128 | |
75 | R | H | -1.8300 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.7056 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.3418 | |
80 | V | H | -0.0728 | |
81 | D | H | -0.6746 | |
82 | T | H | -0.2460 | |
83 | S | H | -0.4313 | |
84 | S | H | -0.5859 | |
85 | S | H | -0.6564 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.4324 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.2711 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.8463 | |
93 | R | H | -2.8255 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.3470 | |
96 | S | H | -2.3256 | |
97 | D | H | -2.5365 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6743 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.5887 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | G | H | 0.0000 | |
108 | T | H | -0.8125 | |
109 | R | H | -1.5971 | |
114 | A | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | H | H | -0.4847 | |
117 | Y | H | -0.1630 | |
118 | W | H | -0.1485 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.1752 | |
121 | G | H | -0.3622 | |
122 | T | H | 0.0000 | |
123 | L | H | 1.1845 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0270 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.1339 | |
128 | S | H | -0.8556 | |
1 | D | L | -2.4850 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.2781 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.4078 | |
6 | Q | L | -1.1203 | |
7 | S | L | -0.8594 | |
8 | P | L | -0.6570 | |
9 | S | L | -0.9168 | |
10 | S | L | -1.2565 | |
11 | L | L | -0.7775 | |
12 | S | L | -0.8717 | |
13 | A | L | 0.0000 | |
14 | S | L | -0.0517 | |
15 | V | L | 0.9449 | |
16 | G | L | -0.3205 | |
17 | D | L | -1.3407 | |
18 | R | L | -2.0609 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.5788 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.8280 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.8348 | |
25 | T | L | 0.0000 | |
26 | S | L | -2.1328 | |
27 | E | L | -2.1355 | |
28 | N | L | -1.3102 | |
29 | I | L | 0.0000 | |
36 | Y | L | 0.8069 | |
37 | N | L | 0.0465 | |
38 | N | L | -0.0201 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.8933 | |
44 | Q | L | -1.3873 | |
45 | K | L | -1.8900 | |
46 | P | L | -1.2977 | |
47 | G | L | -1.6829 | |
48 | K | L | -2.6118 | |
49 | S | L | -1.5993 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.0848 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.0997 | |
56 | A | L | -0.1689 | |
57 | A | L | 0.0000 | |
65 | T | L | -0.3057 | |
66 | N | L | -0.5032 | |
67 | L | L | -0.1115 | |
68 | A | L | 0.0000 | |
69 | D | L | -1.9246 | |
70 | G | L | -1.1809 | |
71 | V | L | -0.5997 | |
72 | P | L | -0.4428 | |
74 | S | L | -0.3372 | |
75 | R | L | -0.7464 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.3076 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.6457 | |
80 | G | L | -0.8447 | |
83 | S | L | -0.7849 | |
84 | G | L | -0.9460 | |
85 | T | L | -1.6823 | |
86 | D | L | -2.1429 | |
87 | Y | L | 0.0000 | |
88 | T | L | -0.6758 | |
89 | L | L | 0.0000 | |
90 | T | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.2576 | |
93 | S | L | -0.9276 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.3628 | |
96 | P | L | -0.5976 | |
97 | E | L | -1.6335 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.6551 | |
100 | A | L | 0.0000 | |
101 | T | L | -1.2314 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | H | L | 0.0000 | |
107 | F | L | 0.0000 | |
108 | W | L | 0.3373 | |
109 | G | L | -0.1491 | |
114 | T | L | -0.5524 | |
115 | P | L | -0.9947 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.6702 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -1.1816 | |
121 | G | L | -1.0344 | |
122 | T | L | 0.0000 | |
123 | K | L | -2.1987 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.2816 | |
126 | I | L | 0.7258 | |
127 | K | L | -0.8723 |