Project name: test

Status: done

Started: 2026-04-14 02:32:06
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Chain sequence(s) A: MKLHHSLLAAAVLALAAPAAFAEGDDADIYSNWDMYNSIYVIGDVWAGGYIKVKSESGALVDQDQTTEANWSLGDGDNSATVDGNALRDAEGNIGANVAAGVGNAQANDVALSSVDGEKVFASAMIFNSQYTDSNLGTDDGHADNQLFYDATVTDNALAGASGNIGLNVAAGVGNAQSNALAASVNSSGTIAKASADSEQTTFWNTLAADCDLDNTALLSGSALSGAIGNIGVNVAAGVGNAQHNGLSIAVAACELCAPPPPDPCPSCGGD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:18)
Show buried residues

Minimal score value
-3.5314
Maximal score value
3.7459
Average score
-0.3936
Total score value
-106.6544

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4895
2 K A -0.7840
3 L A 0.1833
4 H A -0.7446
5 H A -0.8051
6 S A 0.4016
7 L A 1.8314
8 L A 2.1788
9 A A 1.4884
10 A A 1.3136
11 A A 1.5484
12 V A 2.7538
13 L A 2.8490
14 A A 2.0468
15 L A 2.1753
16 A A 0.9689
17 A A 0.3649
18 P A 0.1819
19 A A 0.4978
20 A A 0.7734
21 F A 1.4442
22 A A -0.2276
23 E A -2.0749
24 G A -2.4798
25 D A -3.5314
26 D A -3.1949
27 A A -1.4789
28 D A -1.2124
29 I A 1.2560
30 Y A 1.5390
31 S A 0.3772
32 N A -0.7320
33 W A -0.3029
34 D A -1.2753
35 M A -0.1589
36 Y A 0.7158
37 N A -0.0771
38 S A 1.1071
39 I A 3.0922
40 Y A 3.3813
41 V A 3.7459
42 I A 3.0248
43 G A 0.8272
44 D A -0.1840
45 V A 1.7314
46 W A 1.4485
47 A A 0.9789
48 G A 0.4038
49 G A 0.2812
50 Y A 1.5961
51 I A 1.4881
52 K A -0.7515
53 V A -1.1727
54 K A -2.6762
55 S A -2.5099
56 E A -2.4096
57 S A -1.1291
58 G A -0.7140
59 A A 0.3596
60 L A 0.4382
61 V A -0.5148
62 D A -1.9776
63 Q A -2.2231
64 D A -2.7196
65 Q A -1.3505
66 T A -1.0688
67 T A -0.7365
68 E A -1.3904
69 A A -0.3264
70 N A 0.2494
71 W A 1.4164
72 S A 0.7581
73 L A 0.0759
74 G A -1.8316
75 D A -3.3251
76 G A -1.9150
77 D A -2.6649
78 N A -1.4822
79 S A -0.8808
80 A A 0.0000
81 T A -0.4412
82 V A 0.0000
83 D A -2.5691
84 G A -2.3568
85 N A -2.9378
86 A A -1.8681
87 L A -1.6560
88 R A -3.4163
89 D A -3.2786
90 A A -2.3254
91 E A -2.6613
92 G A -1.8481
93 N A -1.8627
94 I A -0.9281
95 G A -0.8462
96 A A -0.4626
97 N A -0.8510
98 V A 0.0344
99 A A -0.0090
100 A A -0.3509
101 G A -0.2381
102 V A 0.8251
103 G A -0.0292
104 N A -0.0811
105 A A 0.0000
106 Q A -0.5206
107 A A 0.0000
108 N A -0.7326
109 D A 0.0000
110 V A 0.8003
111 A A 0.0000
112 L A 1.2203
113 S A 0.0000
114 S A -0.3864
115 V A 0.0000
116 D A -2.4822
117 G A -2.5314
118 E A -2.7682
119 K A -2.2539
120 V A 0.0000
121 F A -0.5048
122 A A 0.0000
123 S A -0.1307
124 A A 0.0000
125 M A -0.0788
126 I A 0.0000
127 F A -1.6295
128 N A 0.0000
129 S A -2.2790
130 Q A 0.0000
131 Y A -0.6174
132 T A 0.0000
133 D A -0.1553
134 S A 0.2271
135 N A 0.0000
136 L A 1.2231
137 G A 0.0000
138 T A 0.0000
139 D A 0.0000
140 D A -2.9815
141 G A -2.0609
142 H A -2.4983
143 A A -1.8352
144 D A -3.2546
145 N A -2.9603
146 Q A -2.9722
147 L A 0.0000
148 F A -1.7717
149 Y A 0.0000
150 D A -1.3312
151 A A 0.0000
152 T A 0.0223
153 V A 0.0000
154 T A -1.2354
155 D A -2.3768
156 N A -2.8416
157 A A 0.0000
158 L A 0.0000
159 A A -1.6433
160 G A -1.4058
161 A A 0.0000
162 S A -1.0339
163 G A -0.8167
164 N A -0.7528
165 I A 0.0000
166 G A 0.0000
167 L A 0.0000
168 N A 0.0000
169 V A 0.0000
170 A A 0.0000
171 A A 0.0000
172 G A 0.0000
173 V A 0.0000
174 G A 0.0000
175 N A 0.0000
176 A A 0.0000
177 Q A 0.0000
178 S A 0.0000
179 N A 0.0000
180 A A 0.0000
181 L A 0.0000
182 A A 0.0000
183 A A 0.0000
184 S A 0.0000
185 V A 0.9098
186 N A 0.0000
187 S A -0.7354
188 S A -1.1360
189 G A 0.0000
190 T A 0.6913
191 I A 1.7898
192 A A 1.0293
193 K A 0.0978
194 A A 0.1994
195 S A -0.3599
196 A A -0.6297
197 D A -2.3339
198 S A -2.6022
199 E A -2.7240
200 Q A -1.6442
201 T A -0.3921
202 T A 0.1470
203 F A 1.1069
204 W A 1.1554
205 N A 0.2998
206 T A 0.5059
207 L A 0.6023
208 A A -0.3297
209 A A -1.7004
210 D A -2.6271
211 C A -1.2506
212 D A -1.8976
213 L A -1.1357
214 D A -2.2843
215 N A -1.6414
216 T A -0.6473
217 A A 0.0583
218 L A 0.8863
219 L A 1.3057
220 S A -0.0615
221 G A -1.0757
222 S A -1.2310
223 A A -1.2378
224 L A -0.1962
225 S A -0.6479
226 G A -0.5217
227 A A -0.0325
228 I A 1.4488
229 G A 0.1808
230 N A -0.0229
231 I A 1.0272
232 G A 0.1157
233 V A 0.5790
234 N A 0.0000
235 V A 0.5665
236 A A 0.0000
237 A A -0.5918
238 G A 0.0000
239 V A 0.2984
240 G A -0.0574
241 N A -0.5994
242 A A -0.7410
243 Q A -0.7371
244 H A -1.3387
245 N A -0.6217
246 G A -0.9033
247 L A 0.1469
248 S A 0.0560
249 I A 1.0101
250 A A 0.8701
251 V A 1.2871
252 A A 0.8649
253 A A 0.1743
254 C A -0.2112
255 E A -1.0963
256 L A 0.4470
257 C A 0.7773
258 A A 0.2509
259 P A -0.0800
260 P A -0.7442
261 P A -1.0694
262 P A -1.2986
263 D A -1.9746
264 P A -0.9764
265 C A -0.0177
266 P A -0.2380
267 S A 0.0057
268 C A 0.1354
269 G A -0.8813
270 G A -1.5582
271 D A -2.0875
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Laboratory of Theory of Biopolymers 2018