| Chain sequence(s) |
H: QVQLQESGGGLVQPGGSLTLSCTASGFTFRYSDMRWYRQGPGKERAMVARVTSTGSTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCRAQSINWERDYWGQGTTVTVSS
L: ETTVTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGTPTWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 5 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.1568 | |
| 2 | V | H | -0.2858 | |
| 3 | Q | H | -1.1569 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.0196 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2122 | |
| 8 | G | H | -0.4061 | |
| 9 | G | H | -0.3132 | |
| 10 | G | H | 0.0026 | |
| 11 | L | H | 1.5398 | |
| 12 | V | H | 0.2733 | |
| 13 | Q | H | -1.1942 | |
| 14 | P | H | -0.4430 | |
| 15 | G | H | -0.5317 | |
| 16 | G | H | -0.2306 | |
| 17 | S | H | -0.2042 | |
| 18 | L | H | 0.1920 | |
| 19 | T | H | -0.1308 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | 0.0055 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -0.0412 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.2919 | |
| 26 | G | H | -0.3952 | |
| 27 | F | H | 0.3232 | |
| 28 | T | H | 0.0077 | |
| 29 | F | H | 0.0000 | |
| 30 | R | H | -1.6034 | |
| 31 | Y | H | 0.9738 | |
| 32 | S | H | 0.2181 | |
| 33 | D | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | R | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | Y | H | 0.0000 | |
| 38 | R | H | -0.2525 | |
| 39 | Q | H | -0.1977 | |
| 40 | G | H | -0.1381 | |
| 41 | P | H | -0.3527 | |
| 42 | G | H | -0.8238 | |
| 43 | K | H | -1.9724 | |
| 44 | E | H | -1.3253 | |
| 45 | R | H | 0.0000 | |
| 46 | A | H | 0.0249 | |
| 47 | M | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | R | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 52 | T | H | -0.0248 | |
| 53 | S | H | -0.1018 | |
| 54 | T | H | -0.1494 | |
| 55 | G | H | -0.3945 | |
| 56 | S | H | -0.2812 | |
| 57 | T | H | -0.0058 | |
| 58 | Y | H | 0.4297 | |
| 59 | Y | H | 0.2500 | |
| 60 | A | H | -0.2882 | |
| 61 | D | H | -1.9702 | |
| 62 | S | H | -0.5410 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -1.6398 | |
| 65 | G | H | -0.9077 | |
| 66 | R | H | -1.1144 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.0564 | |
| 69 | V | H | 0.0000 | |
| 70 | S | H | -0.2558 | |
| 71 | R | H | -0.6836 | |
| 72 | D | H | -0.7068 | |
| 73 | N | H | -1.0825 | |
| 74 | A | H | -0.4416 | |
| 75 | K | H | -1.8035 | |
| 76 | N | H | -0.9367 | |
| 77 | T | H | 0.0000 | |
| 78 | V | H | 0.0000 | |
| 79 | Y | H | 0.3800 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -0.8623 | |
| 82 | M | H | 0.0000 | |
| 82A | N | H | -0.5047 | |
| 82B | S | H | -0.2763 | |
| 82C | L | H | 0.0000 | |
| 83 | K | H | -1.2077 | |
| 84 | P | H | -0.7950 | |
| 85 | E | H | -1.8665 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.0201 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.4699 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | R | H | 0.0000 | |
| 94 | A | H | 0.0000 | |
| 95 | Q | H | -0.1721 | |
| 96 | S | H | 0.2907 | |
| 97 | I | H | 1.7673 | |
| 98 | N | H | -0.6843 | |
| 99 | W | H | 0.6219 | |
| 100 | E | H | -1.7025 | |
| 100A | R | H | -0.9102 | |
| 101 | D | H | -0.2600 | |
| 102 | Y | H | 0.2123 | |
| 103 | W | H | 0.4696 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2133 | |
| 106 | G | H | -0.3044 | |
| 107 | T | H | -0.0417 | |
| 108 | T | H | -0.0089 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.1478 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.2497 | |
| 113 | S | H | -0.2296 | |
| 1 | E | L | -1.8212 | |
| 2 | T | L | -0.3544 | |
| 3 | T | L | -0.0722 | |
| 4 | V | L | 0.0000 | |
| 5 | T | L | -0.0943 | |
| 6 | Q | L | -0.1755 | |
| 7 | S | L | -0.2375 | |
| 8 | P | L | -0.1221 | |
| 9 | A | L | 0.0045 | |
| 10 | S | L | -0.3695 | |
| 11 | L | L | 0.3006 | |
| 12 | S | L | -0.3265 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | 0.2220 | |
| 15 | V | L | 1.6667 | |
| 16 | G | L | -0.4759 | |
| 17 | E | L | -1.8343 | |
| 18 | T | L | -0.4838 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.1863 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.0219 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.6773 | |
| 25 | A | L | -0.3239 | |
| 26 | S | L | -0.5362 | |
| 27 | E | L | -2.0532 | |
| 28 | N | L | -1.6061 | |
| 29 | I | L | 0.0000 | |
| 30 | Y | L | 1.2971 | |
| 31 | S | L | 0.3006 | |
| 32 | Y | L | 0.5328 | |
| 33 | L | L | 0.0000 | |
| 34 | A | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | -0.2563 | |
| 39 | K | L | -0.9720 | |
| 40 | Q | L | -1.4185 | |
| 41 | G | L | -0.9971 | |
| 42 | K | L | -1.7907 | |
| 43 | S | L | -0.3458 | |
| 44 | P | L | 0.0000 | |
| 45 | Q | L | -0.4740 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | V | L | 0.0000 | |
| 49 | Y | L | 0.4788 | |
| 50 | N | L | -0.3776 | |
| 51 | A | L | 0.0000 | |
| 52 | K | L | -1.7052 | |
| 53 | T | L | -0.2547 | |
| 54 | L | L | 0.4544 | |
| 55 | A | L | 0.0000 | |
| 56 | E | L | -1.9055 | |
| 57 | G | L | -0.7599 | |
| 58 | V | L | 0.1114 | |
| 59 | P | L | -0.1417 | |
| 60 | S | L | -0.3943 | |
| 61 | R | L | -0.9744 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.1116 | |
| 64 | G | L | 0.0000 | |
| 65 | S | L | -0.2075 | |
| 66 | G | L | -0.5280 | |
| 67 | S | L | -0.3105 | |
| 68 | G | L | -0.0898 | |
| 69 | T | L | -0.2659 | |
| 70 | Q | L | -1.3773 | |
| 71 | F | L | 0.0000 | |
| 72 | S | L | -0.0327 | |
| 73 | L | L | 0.0000 | |
| 74 | K | L | -1.1852 | |
| 75 | I | L | 0.0000 | |
| 76 | N | L | -0.9290 | |
| 77 | S | L | -0.3514 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.3904 | |
| 80 | P | L | -0.6478 | |
| 81 | E | L | -1.8663 | |
| 82 | D | L | 0.0000 | |
| 83 | F | L | 0.1873 | |
| 84 | G | L | -0.0671 | |
| 85 | S | L | -0.2749 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | H | L | 0.0000 | |
| 91 | H | L | 0.0277 | |
| 92 | Y | L | 0.9184 | |
| 93 | G | L | -0.1898 | |
| 94 | T | L | -0.1464 | |
| 95 | P | L | -0.0661 | |
| 95A | T | L | -0.0416 | |
| 96 | W | L | 0.0000 | |
| 97 | T | L | -0.0079 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.4789 | |
| 101 | G | L | -0.1541 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.7341 | |
| 104 | L | L | 0.0000 | |
| 105 | E | L | -1.3077 | |
| 106 | I | L | 1.3902 | |
| 107 | K | L | -1.3267 |