Project name: query_structure

Status: done

Started: 2026-03-16 22:53:26
Settings
Chain sequence(s) A: AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.8055
Maximal score value
2.4393
Average score
0.0109
Total score value
0.4019

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.1530
2 G A 0.3036
3 C A 0.8755
4 I A 0.6451
5 K A -1.4907
6 N A -1.8055
7 G A -1.1632
8 G A 0.0000
9 R A -0.8616
10 C A 0.0000
11 N A 0.0306
12 A A 0.3029
13 S A -0.3548
14 A A -0.3503
15 G A -0.5630
16 P A -0.2875
17 P A 0.0963
18 Y A 1.1486
19 C A 0.0000
20 C A 0.1734
21 S A -0.3376
22 S A 0.1076
23 Y A 1.0959
24 C A 1.3776
25 F A 2.4393
26 Q A 1.3550
27 I A 1.3026
28 A A 0.0840
29 G A -0.6655
30 Q A -1.1349
31 S A -0.3975
32 Y A 0.4299
33 G A 0.0000
34 V A 0.9144
35 C A 0.0000
36 K A -1.2520
37 N A -1.7693
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Laboratory of Theory of Biopolymers 2018