| Chain sequence(s) |
A: AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.1530 | |
| 2 | G | A | 0.3036 | |
| 3 | C | A | 0.8755 | |
| 4 | I | A | 0.6451 | |
| 5 | K | A | -1.4907 | |
| 6 | N | A | -1.8055 | |
| 7 | G | A | -1.1632 | |
| 8 | G | A | 0.0000 | |
| 9 | R | A | -0.8616 | |
| 10 | C | A | 0.0000 | |
| 11 | N | A | 0.0306 | |
| 12 | A | A | 0.3029 | |
| 13 | S | A | -0.3548 | |
| 14 | A | A | -0.3503 | |
| 15 | G | A | -0.5630 | |
| 16 | P | A | -0.2875 | |
| 17 | P | A | 0.0963 | |
| 18 | Y | A | 1.1486 | |
| 19 | C | A | 0.0000 | |
| 20 | C | A | 0.1734 | |
| 21 | S | A | -0.3376 | |
| 22 | S | A | 0.1076 | |
| 23 | Y | A | 1.0959 | |
| 24 | C | A | 1.3776 | |
| 25 | F | A | 2.4393 | |
| 26 | Q | A | 1.3550 | |
| 27 | I | A | 1.3026 | |
| 28 | A | A | 0.0840 | |
| 29 | G | A | -0.6655 | |
| 30 | Q | A | -1.1349 | |
| 31 | S | A | -0.3975 | |
| 32 | Y | A | 0.4299 | |
| 33 | G | A | 0.0000 | |
| 34 | V | A | 0.9144 | |
| 35 | C | A | 0.0000 | |
| 36 | K | A | -1.2520 | |
| 37 | N | A | -1.7693 |