| Chain sequence(s) |
H: EVQVVESGGGLAQPGGSLRLSCVVSGSTFSTYGMRWYRQAPGKERERVASVTTGGGLTYYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCNAWRTLGGAQSDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2349 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2442 | |
| 4 | V | H | 0.0000 | |
| 5 | V | H | 1.4617 | |
| 6 | E | H | 0.4284 | |
| 7 | S | H | -0.3854 | |
| 8 | G | H | -0.9690 | |
| 9 | G | H | -0.6481 | |
| 11 | G | H | 0.0636 | |
| 12 | L | H | 0.9711 | |
| 13 | A | H | -0.2723 | |
| 14 | Q | H | -1.4848 | |
| 15 | P | H | -1.6907 | |
| 16 | G | H | -1.5387 | |
| 17 | G | H | -1.0724 | |
| 18 | S | H | -1.0934 | |
| 19 | L | H | -0.7819 | |
| 20 | R | H | -1.7926 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0941 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.9856 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.7931 | |
| 27 | G | H | -1.4374 | |
| 28 | S | H | -1.0854 | |
| 29 | T | H | -0.5994 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7294 | |
| 36 | T | H | -0.0726 | |
| 37 | Y | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | R | H | -0.4478 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | -0.8665 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.9007 | |
| 45 | A | H | -1.6795 | |
| 46 | P | H | -1.1899 | |
| 47 | G | H | -1.8268 | |
| 48 | K | H | -3.0241 | |
| 49 | E | H | -3.4552 | |
| 50 | R | H | -2.6597 | |
| 51 | E | H | -2.3739 | |
| 52 | R | H | -2.2301 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | V | H | 0.0000 | |
| 57 | T | H | 0.0863 | |
| 58 | T | H | -0.5428 | |
| 59 | G | H | -0.7450 | |
| 62 | G | H | -0.6618 | |
| 63 | G | H | 0.1114 | |
| 64 | L | H | 1.4129 | |
| 65 | T | H | 1.0250 | |
| 66 | Y | H | 0.7116 | |
| 67 | Y | H | -0.6595 | |
| 68 | A | H | -1.4944 | |
| 69 | D | H | -2.4035 | |
| 70 | S | H | -1.8027 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5107 | |
| 74 | G | H | -1.7788 | |
| 75 | R | H | -1.7469 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6926 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3857 | |
| 80 | R | H | -1.0777 | |
| 81 | D | H | -1.4798 | |
| 82 | N | H | -1.8831 | |
| 83 | T | H | -1.5191 | |
| 84 | K | H | -2.1020 | |
| 85 | N | H | -1.4026 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.2866 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0841 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3734 | |
| 93 | S | H | -1.3373 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6635 | |
| 96 | P | H | -2.0332 | |
| 97 | E | H | -2.4031 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8674 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2374 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.2623 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | W | H | -0.5301 | |
| 108 | R | H | -0.6517 | |
| 109 | T | H | -0.2189 | |
| 110 | L | H | 0.7179 | |
| 111 | G | H | -0.1971 | |
| 112 | G | H | -0.5671 | |
| 113 | A | H | -0.6808 | |
| 114 | Q | H | -1.4104 | |
| 115 | S | H | -1.0582 | |
| 116 | D | H | -1.2866 | |
| 117 | Y | H | -0.6670 | |
| 118 | W | H | 0.1003 | |
| 119 | G | H | 0.1152 | |
| 120 | Q | H | -0.8992 | |
| 121 | G | H | -0.3855 | |
| 122 | T | H | -0.5309 | |
| 123 | Q | H | -0.7137 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2927 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8385 | |
| 128 | S | H | -0.9292 |