Project name: cddec3ff241416c [mutate: QK194A]

Status: done

Started: 2025-02-14 02:33:50
Settings
Chain sequence(s) A: SIDVKYIGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITIIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLISIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues QK194A
Energy difference between WT (input) and mutated protein (by FoldX) 0.112171 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:27)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:31)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-2.6929
Maximal score value
3.6145
Average score
0.3897
Total score value
52.6104

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
120 S A 0.6745
121 I A 1.5957
122 D A -0.4305
123 V A 0.9133
124 K A -0.4107
125 Y A 0.8458
126 I A 0.9571
127 G A 0.3110
128 V A 1.0897
129 K A -0.8308
130 S A -0.1357
131 A A 0.6472
132 Y A 1.6594
133 V A 1.7271
134 S A 0.5537
135 Y A 0.6646
136 D A -0.8447
137 V A -0.1870
138 Q A -1.9821
139 K A -2.6929
140 R A -2.2645
141 T A -0.1080
142 I A 2.2724
143 Y A 2.8950
144 L A 2.5130
145 N A 0.6568
146 I A 1.2068
147 T A -0.0983
148 N A -0.5846
149 T A -0.3559
150 L A 0.4126
151 N A -0.3533
152 I A 0.4385
153 T A -0.6749
154 N A -1.9961
155 N A -2.0913
156 N A -1.2216
157 Y A 1.1168
158 Y A 1.8855
159 S A 1.2417
160 V A 1.1799
161 E A -0.9768
162 V A 0.1121
163 E A -1.6560
164 N A -1.1845
165 I A -0.0149
166 T A -0.2154
167 A A 0.0865
168 Q A -0.1405
169 V A 1.1060
170 Q A 0.6368
171 F A 1.2855
172 S A -0.3836
173 K A -0.9598
174 T A 0.3736
175 V A 2.2068
176 I A 2.1923
177 G A -0.1187
178 K A -1.7217
179 A A -1.1020
180 R A -1.6210
181 L A 0.1778
182 N A -0.9601
183 N A -0.6190
184 I A 1.7337
185 T A 1.8823
186 I A 3.6145
187 I A 3.0175
188 G A 1.8299
189 P A 1.0030
190 L A 0.9817
191 D A -0.6791
192 M A -0.2771
193 K A -1.9996
194 K A -1.8979 mutated: QK194A
195 I A 0.0212
196 D A -0.9365
197 Y A 1.2215
198 T A 0.9296
199 V A 2.5243
200 P A 1.3495
201 T A 1.7846
202 V A 2.8517
203 I A 2.4221
204 A A 0.1478
205 E A -1.6412
206 E A -2.0798
207 M A 0.0140
208 S A 0.2830
209 Y A 1.5872
210 M A 1.8775
211 Y A 1.8221
212 D A 0.4403
213 F A 1.8674
214 C A 1.2439
215 T A 1.3413
216 L A 2.8341
217 I A 3.2074
218 S A 1.9551
219 I A 2.0035
220 K A -0.4058
221 V A 0.6885
222 H A -0.2966
223 N A -0.2556
224 I A 1.6184
225 V A 2.7002
226 L A 2.9836
227 M A 2.4148
228 M A 0.8751
229 Q A 0.1024
230 V A 1.1360
231 T A 0.9624
232 V A 2.2165
233 T A 0.6637
234 T A 0.4904
235 T A 0.6722
236 Y A 1.3789
237 F A 1.2690
238 G A -0.4838
239 H A -1.5768
240 S A -1.5544
241 E A -2.0133
242 Q A -0.3717
243 I A 1.0537
244 S A -0.0159
245 Q A -1.5220
246 E A -2.3203
247 R A -2.2800
248 Y A -0.3750
249 Q A -0.5609
250 Y A 1.1405
251 V A 0.8918
252 D A -1.1231
253 C A -0.0815
254 G A -0.3901
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018