Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYGMHWFRQAPGKGREWVAVIWYDGSNKYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCARDPRGATLYYYYYGMDVWGQGTQVTVSSEDLYFQSL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48) [INFO] Main: Simulation completed successfully. (00:00:49) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
4 | E | A | -2.1190 | |
5 | V | A | -1.4383 | |
6 | Q | A | -1.2728 | |
7 | L | A | 0.0000 | |
8 | V | A | 1.1940 | |
9 | E | A | 0.0000 | |
10 | S | A | -0.5941 | |
11 | G | A | -1.1726 | |
12 | G | A | -0.7856 | |
13 | G | A | -0.0073 | |
14 | L | A | 1.1331 | |
15 | V | A | 0.1057 | |
16 | Q | A | -1.4617 | |
17 | P | A | -1.4471 | |
18 | G | A | -1.2917 | |
19 | G | A | -1.0054 | |
20 | S | A | -1.1846 | |
21 | L | A | -0.9146 | |
22 | R | A | -2.1511 | |
23 | L | A | 0.0000 | |
24 | S | A | -0.3453 | |
25 | C | A | 0.0000 | |
26 | A | A | -0.2288 | |
27 | A | A | 0.0000 | |
28 | S | A | -1.0990 | |
29 | G | A | -1.2520 | |
30 | F | A | -0.6377 | |
31 | T | A | -0.3078 | |
32 | F | A | 0.0000 | |
33 | S | A | -0.8592 | |
34 | S | A | -0.1964 | |
35 | Y | A | 0.2085 | |
36 | G | A | 0.0000 | |
37 | M | A | 0.0000 | |
38 | H | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -1.8343 | |
43 | A | A | -1.7847 | |
44 | P | A | -1.0690 | |
45 | G | A | -1.7601 | |
46 | K | A | -2.8388 | |
47 | G | A | -2.5758 | |
48 | R | A | -2.7955 | |
49 | E | A | -1.8811 | |
50 | W | A | -0.6370 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | V | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | W | A | -0.3546 | |
56 | Y | A | -0.6060 | |
57 | D | A | -1.7472 | |
58 | G | A | -1.3022 | |
59 | S | A | -1.0537 | |
60 | N | A | -0.9000 | |
61 | K | A | -0.5724 | |
62 | Y | A | 0.0983 | |
63 | Y | A | -0.5370 | |
64 | A | A | -1.1255 | |
65 | D | A | -2.3467 | |
66 | S | A | -1.7683 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5011 | |
69 | G | A | -1.7490 | |
70 | R | A | -1.5088 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.8607 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.4929 | |
75 | R | A | -1.1754 | |
76 | D | A | -1.6116 | |
77 | N | A | -2.0878 | |
78 | A | A | -1.5903 | |
79 | K | A | -2.6183 | |
80 | R | A | -2.4803 | |
81 | M | A | -1.1538 | |
82 | V | A | 0.0000 | |
83 | Y | A | -0.5696 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.2713 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.3458 | |
88 | S | A | -1.1760 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.1441 | |
91 | A | A | -1.6340 | |
92 | E | A | -2.1941 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.7947 | |
95 | A | A | 0.0000 | |
96 | V | A | -0.4309 | |
97 | Y | A | 0.0000 | |
98 | Y | A | -0.1222 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | R | A | 0.0000 | |
102 | D | A | 0.0000 | |
103 | P | A | 0.3448 | |
104 | R | A | 0.0000 | |
105 | G | A | 0.1067 | |
106 | A | A | 0.4359 | |
107 | T | A | 0.6333 | |
108 | L | A | 2.0515 | |
109 | Y | A | 2.3583 | |
110 | Y | A | 0.0000 | |
111 | Y | A | 2.4951 | |
112 | Y | A | 2.8466 | |
113 | Y | A | 2.1015 | |
114 | G | A | 0.8448 | |
115 | M | A | 0.2639 | |
116 | D | A | -0.8060 | |
117 | V | A | -0.5696 | |
118 | W | A | -0.0801 | |
119 | G | A | -0.1263 | |
120 | Q | A | -0.7987 | |
121 | G | A | -0.4878 | |
122 | T | A | -0.6595 | |
123 | Q | A | -0.9302 | |
124 | V | A | 0.0000 | |
125 | T | A | -0.2089 | |
126 | V | A | 0.0000 | |
127 | S | A | -1.4344 | |
128 | S | A | -2.0638 | |
129 | E | A | -2.4024 | |
130 | D | A | -1.4370 | |
131 | L | A | 1.2165 | |
132 | Y | A | 1.9141 | |
133 | F | A | 2.2849 | |
134 | Q | A | 0.5429 | |
135 | S | A | 0.5683 | |
136 | L | A | 1.3477 |