Project name: 36da62eae372af3

Status: done

Started: 2026-05-21 12:16:53
Settings
Chain sequence(s) A: KKGHKGH
C: KKGHKGH
B: KKGHKGH
D: KKGHKGH
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-5.2164
Maximal score value
-2.1128
Average score
-3.6672
Total score value
-102.6811

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -4.1568
2 K A -4.2195
3 G A -3.2600
4 H A -3.6938
5 K A -3.7040
6 G A -2.9484
7 H A -2.2716
1 K B -5.0992
2 K B -5.0768
3 G B -3.8792
4 H B -4.2327
5 K B -4.2108
6 G B -3.2328
7 H B -2.8114
1 K C -4.9521
2 K C -5.2164
3 G C -3.7845
4 H C -4.0861
5 K C -3.8168
6 G C -2.9462
7 H C -2.7216
1 K D -3.9069
2 K D -4.4629
3 G D -3.0530
4 H D -3.2831
5 K D -3.3525
6 G D -2.1892
7 H D -2.1128
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Laboratory of Theory of Biopolymers 2018