| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7838 | |
| 2 | A | A | -0.6412 | |
| 3 | E | A | -1.4532 | |
| 4 | F | A | 1.2594 | |
| 5 | R | A | -1.6672 | |
| 6 | H | A | -1.6540 | |
| 7 | D | A | -1.8982 | |
| 8 | S | A | -0.7025 | |
| 9 | G | A | -0.2613 | |
| 10 | Y | A | 0.9928 | |
| 11 | E | A | -0.3158 | |
| 12 | V | A | 1.4764 | |
| 13 | H | A | -0.6937 | |
| 14 | H | A | -1.2297 | |
| 15 | Q | A | -1.1120 | |
| 16 | K | A | -1.7178 | |
| 17 | L | A | 0.9365 | |
| 18 | V | A | 0.7295 | |
| 19 | F | A | 2.3274 | |
| 20 | F | A | 2.3160 | |
| 21 | A | A | 0.2459 | |
| 22 | E | A | -1.6466 | |
| 23 | D | A | -1.8364 | |
| 24 | V | A | 0.4105 | |
| 25 | G | A | -0.3597 | |
| 26 | S | A | -0.5365 | |
| 27 | N | A | -1.7914 | |
| 28 | K | A | -1.9743 | |
| 29 | G | A | -0.3917 | |
| 30 | A | A | 0.0893 | |
| 31 | I | A | 1.5111 | |
| 32 | I | A | 2.1390 | |
| 33 | G | A | 0.4385 | |
| 34 | L | A | 1.4916 | |
| 35 | M | A | 0.6864 | |
| 36 | V | A | 1.6574 | |
| 37 | G | A | -0.2066 | |
| 38 | G | A | -0.0903 | |
| 39 | V | A | 1.9298 | |
| 40 | V | A | 1.9670 | |
| 41 | I | A | 2.2671 | |
| 42 | A | A | 0.4330 |