| Chain sequence(s) |
A: GLLPLDPRPALRPTSDYVTPTDLLYVAETDLLTETGHPTKDIVVNGKVVVPKVSAYQWRVFLLTLPDPNTLPLPRPDFVDFSTEILIWQLRAYRIHRFGPLGKGSYGHKNFNKLGDVTNPTEPVHEGEDDTVDLSFTPKRLQEYIVGDLPPTGKYTDVAEPQPGLPPGAQPPTKTVTDTIQHGDMADIGFGAKDYAKLEPSKDDVPDIIRDTTTKVPDYDGMRAEPYGRRMFDYGRSESSSSSALYRRAGPDLFPLPDSGPPSPLYTPPPPSSPYAVRPSYRLFTLPDQGEITEDQLLFNRPVFLERTAGLNQGVLWHNRLYITVLDNTRAEIKTEQTQLCTPETNVYDPSCYVTSKTYTREYRLELILQLCRIPLTPETRAELARLDPSILVDARLPDVPPVARPDPLAGKKFIEIDLRDRLRTDLSASALGRWYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.6476 | |
| 2 | L | A | 2.2574 | |
| 3 | L | A | 2.2121 | |
| 4 | P | A | 1.0703 | |
| 5 | L | A | 0.9084 | |
| 6 | D | A | -1.5671 | |
| 7 | P | A | -1.6108 | |
| 8 | R | A | -2.3331 | |
| 9 | P | A | -1.4401 | |
| 10 | A | A | -0.7796 | |
| 11 | L | A | -0.2570 | |
| 12 | R | A | -0.9105 | |
| 13 | P | A | -0.7997 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.4655 | |
| 16 | D | A | -2.0706 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6869 | |
| 20 | P | A | -0.7628 | |
| 21 | T | A | -0.9878 | |
| 22 | D | A | -1.6598 | |
| 23 | L | A | -0.5783 | |
| 24 | L | A | -0.5646 | |
| 25 | Y | A | -0.7567 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1497 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5296 | |
| 31 | L | A | -0.2517 | |
| 32 | L | A | -0.1620 | |
| 33 | T | A | -0.3874 | |
| 34 | E | A | -0.5855 | |
| 35 | T | A | -0.3967 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.3155 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5961 | |
| 40 | K | A | -2.0431 | |
| 41 | D | A | -0.5922 | |
| 42 | I | A | 1.4802 | |
| 43 | V | A | 2.4171 | |
| 44 | V | A | 1.8194 | |
| 45 | N | A | -0.4874 | |
| 46 | G | A | -0.3211 | |
| 47 | K | A | -0.0167 | |
| 48 | V | A | 2.1662 | |
| 49 | V | A | 2.7585 | |
| 50 | V | A | 1.6809 | |
| 51 | P | A | 0.1355 | |
| 52 | K | A | -0.9856 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5230 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.9414 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.5327 | |
| 70 | T | A | -0.1545 | |
| 71 | L | A | 0.0762 | |
| 72 | P | A | -0.2892 | |
| 73 | L | A | -0.6871 | |
| 74 | P | A | -1.2262 | |
| 75 | R | A | -2.5250 | |
| 76 | P | A | -2.1937 | |
| 77 | D | A | -2.7454 | |
| 78 | F | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -1.9890 | |
| 81 | F | A | -0.6156 | |
| 82 | S | A | -0.4938 | |
| 83 | T | A | -0.5668 | |
| 84 | E | A | -0.7757 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.7478 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | R | A | -0.9186 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.1432 | |
| 99 | G | A | -0.4532 | |
| 100 | P | A | -0.7009 | |
| 101 | L | A | -0.5653 | |
| 102 | G | A | -1.1721 | |
| 103 | K | A | -1.9900 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.8253 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.1903 | |
| 108 | H | A | 0.0000 | |
| 109 | K | A | -3.0131 | |
| 110 | N | A | -2.8371 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.4922 | |
| 113 | K | A | -0.5488 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -0.2587 | |
| 117 | V | A | 0.4277 | |
| 118 | T | A | -0.3443 | |
| 119 | N | A | -1.1444 | |
| 120 | P | A | -0.6818 | |
| 121 | T | A | -0.7078 | |
| 122 | E | A | -1.3926 | |
| 123 | P | A | -0.9824 | |
| 124 | V | A | -0.5829 | |
| 125 | H | A | -2.1773 | |
| 126 | E | A | -3.0633 | |
| 127 | G | A | -2.8626 | |
| 128 | E | A | -3.3735 | |
| 129 | D | A | -3.3809 | |
| 130 | D | A | -2.2882 | |
| 131 | T | A | -1.8014 | |
| 132 | V | A | -1.4015 | |
| 133 | D | A | -2.5617 | |
| 134 | L | A | -1.2816 | |
| 135 | S | A | -0.8300 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.6915 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | -1.0502 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | -0.0446 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.4757 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.8727 | |
| 155 | Y | A | -0.6240 | |
| 156 | T | A | -0.5852 | |
| 157 | D | A | -0.9588 | |
| 158 | V | A | -0.8931 | |
| 159 | A | A | -1.3905 | |
| 160 | E | A | -2.3845 | |
| 161 | P | A | -1.6648 | |
| 162 | Q | A | -1.8167 | |
| 163 | P | A | -1.1205 | |
| 164 | G | A | -0.5918 | |
| 165 | L | A | -0.2029 | |
| 166 | P | A | -0.3612 | |
| 167 | P | A | -0.6017 | |
| 168 | G | A | -0.6356 | |
| 169 | A | A | -0.5591 | |
| 170 | Q | A | -1.0580 | |
| 171 | P | A | -1.3658 | |
| 172 | P | A | -1.1969 | |
| 173 | T | A | -1.0817 | |
| 174 | K | A | -1.4975 | |
| 175 | T | A | -0.8200 | |
| 176 | V | A | -0.4948 | |
| 177 | T | A | -0.7537 | |
| 178 | D | A | -0.8848 | |
| 179 | T | A | 0.0000 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -1.0556 | |
| 182 | H | A | -0.8607 | |
| 183 | G | A | -0.6491 | |
| 184 | D | A | -0.6734 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3127 | |
| 190 | F | A | 0.0334 | |
| 191 | G | A | -0.1407 | |
| 192 | A | A | -0.2532 | |
| 193 | K | A | -0.6611 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.8278 | |
| 197 | K | A | -2.0023 | |
| 198 | L | A | -1.2156 | |
| 199 | E | A | -1.5566 | |
| 200 | P | A | -1.4596 | |
| 201 | S | A | -1.2529 | |
| 202 | K | A | -2.2319 | |
| 203 | D | A | -1.8079 | |
| 204 | D | A | -1.2088 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -2.1320 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2764 | |
| 211 | D | A | -2.0857 | |
| 212 | T | A | -1.1894 | |
| 213 | T | A | -0.7954 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0555 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.3121 | |
| 219 | Y | A | -1.4530 | |
| 220 | D | A | -2.6089 | |
| 221 | G | A | -1.9790 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.7339 | |
| 224 | A | A | -1.6547 | |
| 225 | E | A | -1.3843 | |
| 226 | P | A | -0.5737 | |
| 227 | Y | A | -0.2636 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | -0.4888 | |
| 230 | R | A | -0.6397 | |
| 231 | M | A | -0.3960 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.1397 | |
| 234 | Y | A | 0.2553 | |
| 235 | G | A | -0.5072 | |
| 236 | R | A | -1.6615 | |
| 237 | S | A | -1.4040 | |
| 238 | E | A | -1.3231 | |
| 239 | S | A | -0.9619 | |
| 240 | S | A | -1.0091 | |
| 241 | S | A | -0.8870 | |
| 242 | S | A | -0.4216 | |
| 243 | S | A | -0.2073 | |
| 244 | A | A | 0.2234 | |
| 245 | L | A | 1.0356 | |
| 246 | Y | A | 0.6369 | |
| 247 | R | A | 0.5671 | |
| 248 | R | A | -0.2397 | |
| 249 | A | A | -1.3337 | |
| 250 | G | A | -0.8341 | |
| 251 | P | A | 0.0454 | |
| 252 | D | A | 0.9219 | |
| 253 | L | A | 1.7863 | |
| 254 | F | A | 2.4980 | |
| 255 | P | A | 0.5452 | |
| 256 | L | A | 0.0634 | |
| 257 | P | A | -1.0985 | |
| 258 | D | A | -2.2272 | |
| 259 | S | A | -1.4329 | |
| 260 | G | A | -1.1480 | |
| 261 | P | A | -0.6909 | |
| 262 | P | A | -0.3210 | |
| 263 | S | A | -0.1325 | |
| 264 | P | A | 0.4042 | |
| 265 | L | A | 1.4904 | |
| 266 | Y | A | 0.8802 | |
| 267 | T | A | 0.1004 | |
| 268 | P | A | -0.4891 | |
| 269 | P | A | -0.1981 | |
| 270 | P | A | -0.4195 | |
| 271 | P | A | -0.4133 | |
| 272 | S | A | -0.3182 | |
| 273 | S | A | 0.2883 | |
| 274 | P | A | 0.4853 | |
| 275 | Y | A | 1.3510 | |
| 276 | A | A | 0.5514 | |
| 277 | V | A | 0.9933 | |
| 278 | R | A | -0.9960 | |
| 279 | P | A | -0.2496 | |
| 280 | S | A | 0.5368 | |
| 281 | Y | A | 1.7376 | |
| 282 | R | A | 1.0369 | |
| 283 | L | A | 1.9470 | |
| 284 | F | A | 1.2791 | |
| 285 | T | A | 0.6268 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.3079 | |
| 289 | Q | A | 0.0000 | |
| 290 | G | A | -1.4398 | |
| 291 | E | A | -2.0458 | |
| 292 | I | A | -1.6460 | |
| 293 | T | A | -2.0467 | |
| 294 | E | A | -2.9289 | |
| 295 | D | A | -3.1718 | |
| 296 | Q | A | -2.5231 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.1862 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5300 | |
| 301 | R | A | -2.0533 | |
| 302 | P | A | -0.6806 | |
| 303 | V | A | -0.2788 | |
| 304 | F | A | -0.5207 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.6934 | |
| 307 | R | A | -2.8149 | |
| 308 | T | A | -1.3987 | |
| 309 | A | A | -0.7414 | |
| 310 | G | A | -0.7665 | |
| 311 | L | A | -0.3336 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -1.2213 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.5455 | |
| 319 | N | A | -0.8040 | |
| 320 | R | A | -0.6312 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.5618 | |
| 333 | I | A | -2.2220 | |
| 334 | K | A | -2.9324 | |
| 335 | T | A | -2.6619 | |
| 336 | E | A | -3.0040 | |
| 337 | Q | A | -1.9982 | |
| 338 | T | A | -0.7543 | |
| 339 | Q | A | -0.3096 | |
| 340 | L | A | 1.3285 | |
| 341 | C | A | 0.5034 | |
| 342 | T | A | -0.3359 | |
| 343 | P | A | -0.6246 | |
| 344 | E | A | -1.7360 | |
| 345 | T | A | -0.7603 | |
| 346 | N | A | -0.6662 | |
| 347 | V | A | 1.2066 | |
| 348 | Y | A | 1.2367 | |
| 349 | D | A | -0.1355 | |
| 350 | P | A | -0.0329 | |
| 351 | S | A | 0.0913 | |
| 352 | C | A | 0.0000 | |
| 353 | Y | A | 0.3005 | |
| 354 | V | A | 0.5552 | |
| 355 | T | A | -1.1699 | |
| 356 | S | A | -1.7343 | |
| 357 | K | A | -2.5549 | |
| 358 | T | A | -1.7703 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.8001 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.3446 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -0.8865 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.3826 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.7466 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7267 | |
| 376 | L | A | -0.5166 | |
| 377 | T | A | -0.9111 | |
| 378 | P | A | -1.3119 | |
| 379 | E | A | -2.1006 | |
| 380 | T | A | 0.0000 | |
| 381 | R | A | -1.3498 | |
| 382 | A | A | -1.2162 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -0.9256 | |
| 386 | R | A | -1.1279 | |
| 387 | L | A | -0.5486 | |
| 388 | D | A | -0.5952 | |
| 389 | P | A | -0.7565 | |
| 390 | S | A | -0.2944 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.6867 | |
| 394 | D | A | -1.2782 | |
| 395 | A | A | -1.2380 | |
| 396 | R | A | -2.2816 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.5540 | |
| 399 | D | A | -2.0959 | |
| 400 | V | A | -0.9844 | |
| 401 | P | A | -0.4623 | |
| 402 | P | A | -0.1356 | |
| 403 | V | A | 1.4268 | |
| 404 | A | A | 0.4035 | |
| 405 | R | A | -0.5957 | |
| 406 | P | A | -0.6958 | |
| 407 | D | A | -1.0530 | |
| 408 | P | A | -0.7901 | |
| 409 | L | A | 0.0000 | |
| 410 | A | A | -0.8907 | |
| 411 | G | A | -1.1882 | |
| 412 | K | A | -1.6507 | |
| 413 | K | A | -2.2830 | |
| 414 | F | A | -1.2689 | |
| 415 | I | A | -1.0007 | |
| 416 | E | A | -2.1468 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.7900 | |
| 419 | L | A | 0.0000 | |
| 420 | R | A | -3.4042 | |
| 421 | D | A | -3.4676 | |
| 422 | R | A | -2.7898 | |
| 423 | L | A | -1.9772 | |
| 424 | R | A | -2.1883 | |
| 425 | T | A | -1.3854 | |
| 426 | D | A | -2.3102 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -0.8529 | |
| 429 | A | A | -0.9825 | |
| 430 | S | A | 0.0000 | |
| 431 | A | A | -0.1440 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -0.9457 | |
| 435 | W | A | 0.2885 | |
| 436 | Y | A | 0.1756 | |
| 437 | L | A | 0.3179 | |
| 438 | N | A | -1.3305 | |
| 439 | R | A | -1.7423 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine