| Chain sequence(s) |
A: TTCCPSIVARSNFNVCRLPGTPEAICATYTGCIIIPGATCPGDYAN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.0691 | |
| 2 | T | A | 0.1485 | |
| 3 | C | A | 0.0000 | |
| 4 | C | A | 0.0000 | |
| 5 | P | A | -0.0895 | |
| 6 | S | A | 0.2516 | |
| 7 | I | A | 2.3135 | |
| 8 | V | A | 2.1341 | |
| 9 | A | A | 0.0000 | |
| 10 | R | A | -0.3977 | |
| 11 | S | A | -0.4548 | |
| 12 | N | A | -1.3017 | |
| 13 | F | A | 0.0000 | |
| 14 | N | A | -0.9190 | |
| 15 | V | A | 1.5669 | |
| 16 | C | A | 0.2967 | |
| 17 | R | A | -0.4006 | |
| 18 | L | A | 1.3742 | |
| 19 | P | A | -0.0551 | |
| 20 | G | A | -0.5151 | |
| 21 | T | A | -0.1385 | |
| 22 | P | A | -0.3564 | |
| 23 | E | A | -0.7048 | |
| 24 | A | A | 0.1303 | |
| 25 | I | A | 1.0766 | |
| 26 | C | A | 0.0000 | |
| 27 | A | A | -0.0069 | |
| 28 | T | A | 0.1756 | |
| 29 | Y | A | 1.3002 | |
| 30 | T | A | 0.1777 | |
| 31 | G | A | -0.2832 | |
| 32 | C | A | 0.0000 | |
| 33 | I | A | 0.8253 | |
| 34 | I | A | 1.5830 | |
| 35 | I | A | 0.5410 | |
| 36 | P | A | -0.2602 | |
| 37 | G | A | -0.4083 | |
| 38 | A | A | -0.0232 | |
| 39 | T | A | -0.0160 | |
| 40 | C | A | 0.1921 | |
| 41 | P | A | -0.2160 | |
| 42 | G | A | -0.8249 | |
| 43 | D | A | -1.8191 | |
| 44 | Y | A | -0.0189 | |
| 45 | A | A | 0.0160 | |
| 46 | N | A | -0.5338 |