Project name: t-pHrange

Status: done

Started: 2026-05-28 12:29:27
Settings
Chain sequence(s) A: TTCCPSIVARSNFNVCRLPGTPEAICATYTGCIIIPGATCPGDYAN
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-1.8191
Maximal score value
2.3135
Average score
0.0933
Total score value
4.2905

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A -0.0691
2 T A 0.1485
3 C A 0.0000
4 C A 0.0000
5 P A -0.0895
6 S A 0.2516
7 I A 2.3135
8 V A 2.1341
9 A A 0.0000
10 R A -0.3977
11 S A -0.4548
12 N A -1.3017
13 F A 0.0000
14 N A -0.9190
15 V A 1.5669
16 C A 0.2967
17 R A -0.4006
18 L A 1.3742
19 P A -0.0551
20 G A -0.5151
21 T A -0.1385
22 P A -0.3564
23 E A -0.7048
24 A A 0.1303
25 I A 1.0766
26 C A 0.0000
27 A A -0.0069
28 T A 0.1756
29 Y A 1.3002
30 T A 0.1777
31 G A -0.2832
32 C A 0.0000
33 I A 0.8253
34 I A 1.5830
35 I A 0.5410
36 P A -0.2602
37 G A -0.4083
38 A A -0.0232
39 T A -0.0160
40 C A 0.1921
41 P A -0.2160
42 G A -0.8249
43 D A -1.8191
44 Y A -0.0189
45 A A 0.0160
46 N A -0.5338
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Laboratory of Theory of Biopolymers 2018