| Chain sequence(s) |
A: GSPRTEYEACRVRCQVAEHGVERQRRCQQVCEKRLREREGRRE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.8329 | |
| 2 | S | A | -2.5680 | |
| 3 | P | A | -2.3339 | |
| 4 | R | A | -3.0898 | |
| 5 | T | A | -2.0737 | |
| 6 | E | A | -2.8285 | |
| 7 | Y | A | -2.7556 | |
| 8 | E | A | -2.1165 | |
| 9 | A | A | -1.6038 | |
| 10 | C | A | -1.5290 | |
| 11 | R | A | -1.7543 | |
| 12 | V | A | 0.1008 | |
| 13 | R | A | -1.3426 | |
| 14 | C | A | -1.4676 | |
| 15 | Q | A | -1.5333 | |
| 16 | V | A | 0.3355 | |
| 17 | A | A | -0.7402 | |
| 18 | E | A | -1.7906 | |
| 19 | H | A | -1.9092 | |
| 20 | G | A | -1.8043 | |
| 21 | V | A | -1.1741 | |
| 22 | E | A | -3.2113 | |
| 23 | R | A | -4.3526 | |
| 24 | Q | A | -3.4503 | |
| 25 | R | A | -3.5758 | |
| 26 | R | A | -3.6872 | |
| 27 | C | A | -2.8262 | |
| 28 | Q | A | -2.7913 | |
| 29 | Q | A | -2.6939 | |
| 30 | V | A | -0.8508 | |
| 31 | C | A | 0.0000 | |
| 32 | E | A | -3.2655 | |
| 33 | K | A | -3.8979 | |
| 34 | R | A | -4.4164 | |
| 35 | L | A | -4.4402 | |
| 36 | R | A | -5.2642 | |
| 37 | E | A | -5.5829 | |
| 38 | R | A | -5.3637 | |
| 39 | E | A | -4.5549 | |
| 40 | G | A | -4.6879 | |
| 41 | R | A | -4.6727 | |
| 42 | R | A | -4.2645 | |
| 43 | E | A | -3.2041 |