| Chain sequence(s) |
A: MLLELCGKYWGSEEELLELCE
B: MNDTWIFGEELLELLLEEAGDEGCTTDPDE input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -1.0933 | |
| 2 | L | A | 0.0000 | |
| 3 | L | A | -1.3399 | |
| 4 | E | A | -2.1547 | |
| 5 | L | A | -0.6873 | |
| 6 | C | A | 0.0000 | |
| 7 | G | A | -1.9504 | |
| 8 | K | A | -1.6452 | |
| 9 | Y | A | 0.2677 | |
| 10 | W | A | -0.5133 | |
| 11 | G | A | -1.3625 | |
| 12 | S | A | -2.1301 | |
| 13 | E | A | -3.1268 | |
| 14 | E | A | -3.5750 | |
| 15 | E | A | -3.3345 | |
| 16 | L | A | 0.0000 | |
| 17 | L | A | -1.9342 | |
| 18 | E | A | -3.0975 | |
| 19 | L | A | -1.2029 | |
| 20 | C | A | -0.9644 | |
| 21 | E | A | -1.9365 | |
| 1 | M | B | 0.2061 | |
| 2 | N | B | -0.8475 | |
| 3 | D | B | -0.9440 | |
| 4 | T | B | 0.3338 | |
| 5 | W | B | 0.9982 | |
| 6 | I | B | 1.2220 | |
| 7 | F | B | 1.3261 | |
| 8 | G | B | 0.0000 | |
| 9 | E | B | -0.3644 | |
| 10 | E | B | -1.1269 | |
| 11 | L | B | -0.1727 | |
| 12 | L | B | -0.8399 | |
| 13 | E | B | -2.4899 | |
| 14 | L | B | -1.3206 | |
| 15 | L | B | -1.1503 | |
| 16 | L | B | -1.8932 | |
| 17 | E | B | -3.0956 | |
| 18 | E | B | -3.1830 | |
| 19 | A | B | -2.3286 | |
| 20 | G | B | -3.1010 | |
| 21 | D | B | -3.5251 | |
| 22 | E | B | -2.9733 | |
| 23 | G | B | -1.5249 | |
| 24 | C | B | -1.8090 | |
| 25 | T | B | -1.9290 | |
| 26 | T | B | -1.5918 | |
| 27 | D | B | -2.8656 | |
| 28 | P | B | -2.5610 | |
| 29 | D | B | -3.2788 | |
| 30 | E | B | -3.1561 |