| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASDDTFSRYDMSWVRQAPGKGLEWVSAEDDSDDEDYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDHYDSGYYRMDEVWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASRSISSDLNWYQQKPGKAPKLLIYAEDSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCEDWYDWPRDFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42)
[INFO] Main: Simulation completed successfully. (00:02:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | E | H | -2.1640 | |
| 1 | V | H | -1.1937 | |
| 2 | Q | H | -1.2873 | |
| 3 | L | H | 0.0000 | |
| 4 | L | H | 0.2414 | |
| 5 | E | H | 0.0000 | |
| 6 | S | H | -0.4322 | |
| 7 | G | H | -0.6080 | |
| 8 | G | H | 0.0300 | |
| 9 | G | H | 0.7884 | |
| 10 | L | H | 1.2502 | |
| 11 | V | H | 0.0000 | |
| 12 | Q | H | -1.5512 | |
| 13 | P | H | -1.9334 | |
| 14 | G | H | -1.6639 | |
| 15 | G | H | -1.1361 | |
| 16 | S | H | -1.3993 | |
| 17 | L | H | -1.0576 | |
| 18 | R | H | -2.0948 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.5313 | |
| 21 | C | H | 0.0000 | |
| 22 | A | H | -0.3702 | |
| 23 | A | H | 0.0000 | |
| 24 | S | H | -1.6815 | |
| 25 | D | H | -2.6058 | |
| 26 | D | H | -2.1535 | |
| 27 | T | H | -1.4188 | |
| 28 | F | H | 0.0000 | |
| 29 | S | H | -1.8558 | |
| 30 | R | H | -1.8722 | |
| 31 | Y | H | -0.5899 | |
| 32 | D | H | 0.0000 | |
| 33 | M | H | 0.0000 | |
| 34 | S | H | 0.0000 | |
| 35 | W | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | R | H | 0.0000 | |
| 38 | Q | H | -0.7371 | |
| 39 | A | H | -1.1314 | |
| 40 | P | H | -0.8855 | |
| 41 | G | H | -1.5250 | |
| 42 | K | H | -2.3933 | |
| 43 | G | H | -1.6861 | |
| 44 | L | H | 0.0000 | |
| 45 | E | H | -1.2273 | |
| 46 | W | H | 0.0000 | |
| 47 | V | H | 0.0000 | |
| 48 | S | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | E | H | 0.0000 | |
| 51 | D | H | -1.9252 | |
| 52 | D | H | 0.0000 | |
| 53 | S | H | -1.9940 | |
| 54 | D | H | -3.0107 | |
| 55 | D | H | -3.0373 | |
| 56 | E | H | -3.2506 | |
| 57 | D | H | -2.1823 | |
| 58 | Y | H | -0.9139 | |
| 59 | Y | H | -0.9206 | |
| 60 | A | H | -1.3936 | |
| 61 | D | H | -2.4963 | |
| 62 | S | H | -1.7922 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -2.5982 | |
| 65 | G | H | -1.8127 | |
| 66 | R | H | -1.5958 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.9516 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.8897 | |
| 71 | R | H | -1.1814 | |
| 72 | D | H | -1.7328 | |
| 73 | N | H | -2.2078 | |
| 74 | S | H | -1.7796 | |
| 75 | K | H | -2.5457 | |
| 76 | N | H | -2.2763 | |
| 77 | T | H | -1.1961 | |
| 78 | L | H | 0.0000 | |
| 79 | Y | H | -0.5360 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.2471 | |
| 82 | M | H | 0.0000 | |
| 83 | N | H | -1.5876 | |
| 84 | S | H | -1.4675 | |
| 85 | L | H | 0.0000 | |
| 86 | R | H | -2.9819 | |
| 87 | A | H | -2.0848 | |
| 88 | E | H | -2.4527 | |
| 89 | D | H | 0.0000 | |
| 90 | T | H | -0.5850 | |
| 91 | A | H | 0.0000 | |
| 92 | V | H | 0.5046 | |
| 93 | Y | H | 0.0000 | |
| 94 | Y | H | 0.0000 | |
| 95 | C | H | 0.0000 | |
| 96 | A | H | 0.0000 | |
| 97 | R | H | 0.0000 | |
| 98 | D | H | 0.0000 | |
| 99 | H | H | -0.2061 | |
| 100 | Y | H | 0.0745 | |
| 101 | D | H | -1.2510 | |
| 102 | S | H | -0.3266 | |
| 103 | G | H | 0.2838 | |
| 104 | Y | H | 1.3702 | |
| 105 | Y | H | 1.5368 | |
| 106 | R | H | 0.1772 | |
| 107 | M | H | 0.0000 | |
| 108 | D | H | 0.0000 | |
| 109 | E | H | 0.0000 | |
| 110 | V | H | 0.2387 | |
| 111 | W | H | -0.1241 | |
| 112 | G | H | 0.0000 | |
| 113 | Q | H | -1.4759 | |
| 114 | G | H | 0.0000 | |
| 115 | T | H | 0.3422 | |
| 116 | L | H | 1.4091 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | 0.1350 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.7077 | |
| 121 | S | H | -0.5936 | |
| 122 | D | L | -2.4661 | |
| 123 | I | L | -2.0988 | |
| 124 | Q | L | -2.4428 | |
| 125 | M | L | 0.0000 | |
| 126 | T | L | -1.4648 | |
| 127 | Q | L | 0.0000 | |
| 128 | S | L | -0.8609 | |
| 129 | P | L | -0.4807 | |
| 130 | S | L | -0.8793 | |
| 131 | S | L | -0.9295 | |
| 132 | L | L | -0.4046 | |
| 133 | S | L | -0.7223 | |
| 134 | A | L | 0.0000 | |
| 135 | S | L | -0.2983 | |
| 136 | V | L | 0.6188 | |
| 137 | G | L | -0.6789 | |
| 138 | D | L | -1.6444 | |
| 139 | R | L | -2.2858 | |
| 140 | V | L | 0.0000 | |
| 141 | T | L | -0.5936 | |
| 142 | I | L | 0.0000 | |
| 143 | T | L | -0.7824 | |
| 144 | C | L | 0.0000 | |
| 145 | R | L | -2.8404 | |
| 146 | A | L | 0.0000 | |
| 147 | S | L | -2.3097 | |
| 148 | R | L | -2.8227 | |
| 149 | S | L | -1.4707 | |
| 150 | I | L | 0.0000 | |
| 151 | S | L | -0.6085 | |
| 152 | S | L | -0.5799 | |
| 153 | D | L | -0.4190 | |
| 154 | L | L | 0.0000 | |
| 155 | N | L | 0.0000 | |
| 156 | W | L | 0.0000 | |
| 157 | Y | L | 0.0000 | |
| 158 | Q | L | 0.0000 | |
| 159 | Q | L | 0.0000 | |
| 160 | K | L | -1.6119 | |
| 161 | P | L | -1.1862 | |
| 162 | G | L | -1.6462 | |
| 163 | K | L | -2.5717 | |
| 164 | A | L | -1.6495 | |
| 165 | P | L | 0.0000 | |
| 166 | K | L | -1.5482 | |
| 167 | L | L | 0.0000 | |
| 168 | L | L | 0.0000 | |
| 169 | I | L | 0.0000 | |
| 170 | Y | L | 0.0000 | |
| 171 | A | L | -0.8682 | |
| 172 | E | L | -1.4306 | |
| 173 | D | L | -2.0540 | |
| 174 | S | L | -0.8947 | |
| 175 | L | L | -0.2728 | |
| 176 | Q | L | -0.4958 | |
| 177 | S | L | -0.3671 | |
| 178 | G | L | -0.5100 | |
| 179 | V | L | -0.3611 | |
| 180 | P | L | -0.3224 | |
| 181 | S | L | -0.3990 | |
| 182 | R | L | -0.7518 | |
| 183 | F | L | 0.0000 | |
| 184 | S | L | -0.7114 | |
| 185 | G | L | -1.0066 | |
| 186 | S | L | -1.1818 | |
| 187 | G | L | -1.2861 | |
| 188 | S | L | -1.2230 | |
| 189 | G | L | -1.2973 | |
| 190 | T | L | -1.8971 | |
| 191 | D | L | -2.0996 | |
| 192 | F | L | 0.0000 | |
| 193 | T | L | -0.9340 | |
| 194 | L | L | 0.0000 | |
| 195 | T | L | -0.5716 | |
| 196 | I | L | 0.0000 | |
| 197 | S | L | -1.2952 | |
| 198 | S | L | -1.0610 | |
| 199 | L | L | 0.0000 | |
| 200 | Q | L | -0.5752 | |
| 201 | P | L | -0.6542 | |
| 202 | E | L | -1.6715 | |
| 203 | D | L | 0.0000 | |
| 204 | F | L | -0.0504 | |
| 205 | A | L | 0.0000 | |
| 206 | T | L | 0.0000 | |
| 207 | Y | L | 0.0000 | |
| 208 | Y | L | 0.0000 | |
| 209 | C | L | 0.0000 | |
| 210 | E | L | 0.0000 | |
| 211 | D | L | 0.0000 | |
| 212 | W | L | 0.2104 | |
| 213 | Y | L | 0.4770 | |
| 214 | D | L | -1.2214 | |
| 215 | W | L | -0.4735 | |
| 216 | P | L | -0.7539 | |
| 217 | R | L | 0.0000 | |
| 218 | D | L | -1.2484 | |
| 219 | F | L | 0.0000 | |
| 220 | G | L | 0.0000 | |
| 221 | Q | L | -1.9945 | |
| 222 | G | L | -1.3279 | |
| 223 | T | L | 0.0000 | |
| 224 | K | L | -1.7098 | |
| 225 | L | L | 0.0000 | |
| 226 | E | L | -1.0375 | |
| 227 | I | L | 0.1855 | |
| 228 | K | L | -1.1229 |