Project name: Muhammad Sohaib Hassan

Status: done

Started: 2026-04-30 20:16:04
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASDDTFSRYDMSWVRQAPGKGLEWVSAEDDSDDEDYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDHYDSGYYRMDEVWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASRSISSDLNWYQQKPGKAPKLLIYAEDSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCEDWYDWPRDFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:44)
Show buried residues

Minimal score value
-3.2506
Maximal score value
1.5368
Average score
-0.7339
Total score value
-168.0555

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 E H -2.1640
1 V H -1.1937
2 Q H -1.2873
3 L H 0.0000
4 L H 0.2414
5 E H 0.0000
6 S H -0.4322
7 G H -0.6080
8 G H 0.0300
9 G H 0.7884
10 L H 1.2502
11 V H 0.0000
12 Q H -1.5512
13 P H -1.9334
14 G H -1.6639
15 G H -1.1361
16 S H -1.3993
17 L H -1.0576
18 R H -2.0948
19 L H 0.0000
20 S H -0.5313
21 C H 0.0000
22 A H -0.3702
23 A H 0.0000
24 S H -1.6815
25 D H -2.6058
26 D H -2.1535
27 T H -1.4188
28 F H 0.0000
29 S H -1.8558
30 R H -1.8722
31 Y H -0.5899
32 D H 0.0000
33 M H 0.0000
34 S H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7371
39 A H -1.1314
40 P H -0.8855
41 G H -1.5250
42 K H -2.3933
43 G H -1.6861
44 L H 0.0000
45 E H -1.2273
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 E H 0.0000
51 D H -1.9252
52 D H 0.0000
53 S H -1.9940
54 D H -3.0107
55 D H -3.0373
56 E H -3.2506
57 D H -2.1823
58 Y H -0.9139
59 Y H -0.9206
60 A H -1.3936
61 D H -2.4963
62 S H -1.7922
63 V H 0.0000
64 K H -2.5982
65 G H -1.8127
66 R H -1.5958
67 F H 0.0000
68 T H -0.9516
69 I H 0.0000
70 S H -0.8897
71 R H -1.1814
72 D H -1.7328
73 N H -2.2078
74 S H -1.7796
75 K H -2.5457
76 N H -2.2763
77 T H -1.1961
78 L H 0.0000
79 Y H -0.5360
80 L H 0.0000
81 Q H -1.2471
82 M H 0.0000
83 N H -1.5876
84 S H -1.4675
85 L H 0.0000
86 R H -2.9819
87 A H -2.0848
88 E H -2.4527
89 D H 0.0000
90 T H -0.5850
91 A H 0.0000
92 V H 0.5046
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H 0.0000
98 D H 0.0000
99 H H -0.2061
100 Y H 0.0745
101 D H -1.2510
102 S H -0.3266
103 G H 0.2838
104 Y H 1.3702
105 Y H 1.5368
106 R H 0.1772
107 M H 0.0000
108 D H 0.0000
109 E H 0.0000
110 V H 0.2387
111 W H -0.1241
112 G H 0.0000
113 Q H -1.4759
114 G H 0.0000
115 T H 0.3422
116 L H 1.4091
117 V H 0.0000
118 T H 0.1350
119 V H 0.0000
120 S H -0.7077
121 S H -0.5936
122 D L -2.4661
123 I L -2.0988
124 Q L -2.4428
125 M L 0.0000
126 T L -1.4648
127 Q L 0.0000
128 S L -0.8609
129 P L -0.4807
130 S L -0.8793
131 S L -0.9295
132 L L -0.4046
133 S L -0.7223
134 A L 0.0000
135 S L -0.2983
136 V L 0.6188
137 G L -0.6789
138 D L -1.6444
139 R L -2.2858
140 V L 0.0000
141 T L -0.5936
142 I L 0.0000
143 T L -0.7824
144 C L 0.0000
145 R L -2.8404
146 A L 0.0000
147 S L -2.3097
148 R L -2.8227
149 S L -1.4707
150 I L 0.0000
151 S L -0.6085
152 S L -0.5799
153 D L -0.4190
154 L L 0.0000
155 N L 0.0000
156 W L 0.0000
157 Y L 0.0000
158 Q L 0.0000
159 Q L 0.0000
160 K L -1.6119
161 P L -1.1862
162 G L -1.6462
163 K L -2.5717
164 A L -1.6495
165 P L 0.0000
166 K L -1.5482
167 L L 0.0000
168 L L 0.0000
169 I L 0.0000
170 Y L 0.0000
171 A L -0.8682
172 E L -1.4306
173 D L -2.0540
174 S L -0.8947
175 L L -0.2728
176 Q L -0.4958
177 S L -0.3671
178 G L -0.5100
179 V L -0.3611
180 P L -0.3224
181 S L -0.3990
182 R L -0.7518
183 F L 0.0000
184 S L -0.7114
185 G L -1.0066
186 S L -1.1818
187 G L -1.2861
188 S L -1.2230
189 G L -1.2973
190 T L -1.8971
191 D L -2.0996
192 F L 0.0000
193 T L -0.9340
194 L L 0.0000
195 T L -0.5716
196 I L 0.0000
197 S L -1.2952
198 S L -1.0610
199 L L 0.0000
200 Q L -0.5752
201 P L -0.6542
202 E L -1.6715
203 D L 0.0000
204 F L -0.0504
205 A L 0.0000
206 T L 0.0000
207 Y L 0.0000
208 Y L 0.0000
209 C L 0.0000
210 E L 0.0000
211 D L 0.0000
212 W L 0.2104
213 Y L 0.4770
214 D L -1.2214
215 W L -0.4735
216 P L -0.7539
217 R L 0.0000
218 D L -1.2484
219 F L 0.0000
220 G L 0.0000
221 Q L -1.9945
222 G L -1.3279
223 T L 0.0000
224 K L -1.7098
225 L L 0.0000
226 E L -1.0375
227 I L 0.1855
228 K L -1.1229
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Laboratory of Theory of Biopolymers 2018