| Chain sequence(s) |
A: MSHHHHHHSGPTYEWPEEEKLEEAKKTLSEEEKEILEKAEEIKEKKGYWEGMREHRPVVFTKEEYEIMDKASDIYFDIMEKLHKPNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:22)
[INFO] Main: Simulation completed successfully. (00:03:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5509 | |
| 2 | S | A | -0.6205 | |
| 3 | H | A | -1.7481 | |
| 4 | H | A | -2.3489 | |
| 5 | H | A | -2.7558 | |
| 6 | H | A | -2.7939 | |
| 7 | H | A | -2.5704 | |
| 8 | H | A | -2.2503 | |
| 9 | S | A | -1.5012 | |
| 10 | G | A | -0.9843 | |
| 11 | P | A | -0.5950 | |
| 12 | T | A | -0.1129 | |
| 13 | Y | A | 0.5486 | |
| 14 | E | A | -0.9842 | |
| 15 | W | A | -0.2196 | |
| 16 | P | A | -1.9089 | |
| 17 | E | A | -3.9319 | |
| 18 | E | A | -4.5154 | |
| 19 | E | A | -5.0511 | |
| 20 | K | A | -4.4335 | |
| 21 | L | A | -3.6451 | |
| 22 | E | A | -4.9526 | |
| 23 | E | A | -4.4987 | |
| 24 | A | A | 0.0000 | |
| 25 | K | A | -2.8438 | |
| 26 | K | A | -3.1675 | |
| 27 | T | A | -1.8616 | |
| 28 | L | A | -1.9688 | |
| 29 | S | A | -2.4022 | |
| 30 | E | A | -3.7498 | |
| 31 | E | A | -3.8983 | |
| 32 | E | A | -3.2840 | |
| 33 | K | A | -3.8176 | |
| 34 | E | A | -4.1864 | |
| 35 | I | A | -3.3935 | |
| 36 | L | A | 0.0000 | |
| 37 | E | A | -4.1682 | |
| 38 | K | A | -3.5671 | |
| 39 | A | A | 0.0000 | |
| 40 | E | A | -4.4645 | |
| 41 | E | A | -4.7692 | |
| 42 | I | A | 0.0000 | |
| 43 | K | A | -2.9080 | |
| 44 | E | A | -4.2277 | |
| 45 | K | A | -3.6124 | |
| 46 | K | A | -2.1410 | |
| 47 | G | A | -1.8424 | |
| 48 | Y | A | -1.3469 | |
| 49 | W | A | -1.5216 | |
| 50 | E | A | -3.1042 | |
| 51 | G | A | -2.3702 | |
| 52 | M | A | -2.0087 | |
| 53 | R | A | -3.5083 | |
| 54 | E | A | -4.0321 | |
| 55 | H | A | -3.3534 | |
| 56 | R | A | -3.1628 | |
| 57 | P | A | -1.0225 | |
| 58 | V | A | 0.3500 | |
| 59 | V | A | 1.6300 | |
| 60 | F | A | 0.4585 | |
| 61 | T | A | -0.8032 | |
| 62 | K | A | -2.3157 | |
| 63 | E | A | -2.8199 | |
| 64 | E | A | 0.0000 | |
| 65 | Y | A | -0.8224 | |
| 66 | E | A | -2.6835 | |
| 67 | I | A | -1.9982 | |
| 68 | M | A | -1.9234 | |
| 69 | D | A | -2.3161 | |
| 70 | K | A | -2.1633 | |
| 71 | A | A | 0.0000 | |
| 72 | S | A | -1.4208 | |
| 73 | D | A | -2.1556 | |
| 74 | I | A | 0.0000 | |
| 75 | Y | A | -0.4765 | |
| 76 | F | A | 0.0893 | |
| 77 | D | A | -1.8490 | |
| 78 | I | A | 0.0000 | |
| 79 | M | A | -0.7228 | |
| 80 | E | A | -2.1099 | |
| 81 | K | A | -2.3889 | |
| 82 | L | A | -1.8425 | |
| 83 | H | A | -2.1933 | |
| 84 | K | A | -2.8837 | |
| 85 | P | A | -2.0767 | |
| 86 | N | A | -2.0632 | |
| 87 | S | A | -1.1903 |