| Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLSCAASGMTGIFWRLRWYRQAPGKEREWVCGISQLPTPASYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCAAANVLPGLPAELPIYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3970 | |
| 2 | V | A | -0.7465 | |
| 3 | Q | A | -0.7874 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.4647 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.7009 | |
| 8 | G | A | -1.1377 | |
| 9 | G | A | -0.7198 | |
| 10 | A | A | 0.1522 | |
| 11 | L | A | 1.1674 | |
| 12 | V | A | 0.0741 | |
| 13 | Q | A | -1.2688 | |
| 14 | P | A | -1.4749 | |
| 15 | G | A | -1.2828 | |
| 16 | G | A | -0.8427 | |
| 17 | S | A | -1.2224 | |
| 18 | L | A | -0.9879 | |
| 19 | R | A | -2.2060 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5413 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3541 | |
| 24 | A | A | -0.1738 | |
| 25 | S | A | -0.8334 | |
| 26 | G | A | -0.9530 | |
| 27 | M | A | -0.0646 | |
| 28 | T | A | 0.1963 | |
| 29 | G | A | 0.3309 | |
| 30 | I | A | 0.8569 | |
| 31 | F | A | 0.0000 | |
| 32 | W | A | 0.5017 | |
| 33 | R | A | -0.7754 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | -0.4905 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.8729 | |
| 38 | R | A | -1.6264 | |
| 39 | Q | A | -2.3677 | |
| 40 | A | A | -2.2060 | |
| 41 | P | A | -1.6157 | |
| 42 | G | A | -1.9350 | |
| 43 | K | A | -3.4829 | |
| 44 | E | A | -3.7287 | |
| 45 | R | A | -3.0607 | |
| 46 | E | A | -2.9414 | |
| 47 | W | A | -1.1604 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | -0.4605 | |
| 51 | I | A | -0.2944 | |
| 52 | S | A | -0.1638 | |
| 53 | Q | A | -0.0127 | |
| 54 | L | A | 0.7231 | |
| 55 | P | A | 0.1789 | |
| 56 | T | A | 0.0560 | |
| 57 | P | A | -0.1629 | |
| 58 | A | A | -0.1176 | |
| 59 | S | A | -0.6857 | |
| 60 | Y | A | -1.1780 | |
| 61 | E | A | -2.1563 | |
| 62 | D | A | -2.7982 | |
| 63 | S | A | -1.8460 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.8051 | |
| 66 | G | A | -1.8169 | |
| 67 | R | A | -1.3595 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9321 | |
| 70 | C | A | 0.0000 | |
| 71 | S | A | -0.7218 | |
| 72 | R | A | -1.6269 | |
| 73 | D | A | -2.4143 | |
| 74 | D | A | -2.7389 | |
| 75 | A | A | -1.9553 | |
| 76 | R | A | -2.9171 | |
| 77 | N | A | -1.9314 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.7516 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.4696 | |
| 83 | L | A | 0.0000 | |
| 84 | N | A | -1.3195 | |
| 85 | S | A | -1.1233 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.0879 | |
| 88 | P | A | -1.7915 | |
| 89 | E | A | -2.2743 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8940 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.6527 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.4894 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.2629 | |
| 100 | N | A | 0.5760 | |
| 101 | V | A | 0.8942 | |
| 102 | L | A | 1.7479 | |
| 103 | P | A | 0.5770 | |
| 104 | G | A | 0.2926 | |
| 105 | L | A | 0.8698 | |
| 106 | P | A | -0.1389 | |
| 107 | A | A | -0.4266 | |
| 108 | E | A | -1.3644 | |
| 109 | L | A | 0.1247 | |
| 110 | P | A | 0.1826 | |
| 111 | I | A | 0.8017 | |
| 112 | Y | A | 0.8202 | |
| 113 | W | A | 0.5261 | |
| 114 | G | A | -0.0473 | |
| 115 | Q | A | -1.0651 | |
| 116 | G | A | -0.6436 | |
| 117 | T | A | 0.0000 | |
| 118 | Q | A | -1.1518 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.2117 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.6234 | |
| 123 | S | A | -0.8952 |