| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYRITYGETGVGSYYHQEFTVPGSKSTATISGLSPGVDYTITVYAVGWWYPGWHGYTRSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7841 | |
| 2 | S | A | 0.8161 | |
| 3 | S | A | 0.5408 | |
| 4 | V | A | 0.1437 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6184 | |
| 7 | K | A | -2.6602 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9442 | |
| 10 | V | A | 0.0698 | |
| 11 | V | A | 1.5115 | |
| 12 | A | A | 0.8733 | |
| 13 | A | A | 0.2888 | |
| 14 | T | A | -0.3862 | |
| 15 | P | A | -0.8075 | |
| 16 | T | A | -0.5406 | |
| 17 | S | A | -0.3304 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7062 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9886 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6869 | |
| 24 | A | A | -1.2452 | |
| 25 | P | A | -0.0070 | |
| 26 | A | A | 0.3931 | |
| 27 | V | A | 0.7781 | |
| 28 | T | A | 0.1609 | |
| 29 | V | A | -0.2195 | |
| 30 | D | A | -0.8904 | |
| 31 | H | A | -1.1459 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -1.2738 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -1.1322 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.8580 | |
| 39 | T | A | -0.9801 | |
| 40 | G | A | -0.5134 | |
| 41 | V | A | 0.5254 | |
| 42 | G | A | 0.3460 | |
| 43 | S | A | 0.4692 | |
| 44 | Y | A | 1.6344 | |
| 45 | Y | A | 1.3249 | |
| 46 | H | A | -0.1614 | |
| 47 | Q | A | -1.3514 | |
| 48 | E | A | -2.1038 | |
| 49 | F | A | -0.8527 | |
| 50 | T | A | -0.6086 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2533 | |
| 53 | G | A | -1.3692 | |
| 54 | S | A | -1.3417 | |
| 55 | K | A | -2.1457 | |
| 56 | S | A | -1.4972 | |
| 57 | T | A | -0.7919 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2245 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.4818 | |
| 62 | G | A | -0.6914 | |
| 63 | L | A | 0.0000 | |
| 64 | S | A | -0.8348 | |
| 65 | P | A | -0.9869 | |
| 66 | G | A | -1.0631 | |
| 67 | V | A | -0.8691 | |
| 68 | D | A | -1.7014 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.9145 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.5064 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.4128 | |
| 75 | A | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | G | A | 0.5156 | |
| 78 | W | A | 1.7759 | |
| 79 | W | A | 2.3769 | |
| 80 | Y | A | 1.9734 | |
| 81 | P | A | 0.6655 | |
| 82 | G | A | 0.3368 | |
| 83 | W | A | 1.1659 | |
| 84 | H | A | 0.1754 | |
| 85 | G | A | 0.3892 | |
| 86 | Y | A | 0.9945 | |
| 87 | T | A | 0.0830 | |
| 88 | R | A | -1.0038 | |
| 89 | S | A | -0.3762 | |
| 90 | P | A | -0.4515 | |
| 91 | I | A | -0.0533 | |
| 92 | S | A | -0.3869 | |
| 93 | I | A | -0.5620 | |
| 94 | N | A | -1.7353 | |
| 95 | Y | A | -1.4343 | |
| 96 | R | A | -2.3260 | |
| 97 | T | A | -1.1774 |