Project name: query_structure

Status: done

Started: 2026-03-17 01:21:43
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYRITYGETGVGSYYHQEFTVPGSKSTATISGLSPGVDYTITVYAVGWWYPGWHGYTRSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-2.6869
Maximal score value
2.3769
Average score
-0.2952
Total score value
-28.6314

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7841
2 S A 0.8161
3 S A 0.5408
4 V A 0.1437
5 P A 0.0000
6 T A -1.6184
7 K A -2.6602
8 L A 0.0000
9 E A -1.9442
10 V A 0.0698
11 V A 1.5115
12 A A 0.8733
13 A A 0.2888
14 T A -0.3862
15 P A -0.8075
16 T A -0.5406
17 S A -0.3304
18 L A 0.0000
19 L A 0.7062
20 I A 0.0000
21 S A -0.9886
22 W A 0.0000
23 D A -2.6869
24 A A -1.2452
25 P A -0.0070
26 A A 0.3931
27 V A 0.7781
28 T A 0.1609
29 V A -0.2195
30 D A -0.8904
31 H A -1.1459
32 Y A 0.0000
33 R A -1.2738
34 I A 0.0000
35 T A -1.1322
36 Y A 0.0000
37 G A 0.0000
38 E A -0.8580
39 T A -0.9801
40 G A -0.5134
41 V A 0.5254
42 G A 0.3460
43 S A 0.4692
44 Y A 1.6344
45 Y A 1.3249
46 H A -0.1614
47 Q A -1.3514
48 E A -2.1038
49 F A -0.8527
50 T A -0.6086
51 V A 0.0000
52 P A -1.2533
53 G A -1.3692
54 S A -1.3417
55 K A -2.1457
56 S A -1.4972
57 T A -0.7919
58 A A 0.0000
59 T A 0.2245
60 I A 0.0000
61 S A -0.4818
62 G A -0.6914
63 L A 0.0000
64 S A -0.8348
65 P A -0.9869
66 G A -1.0631
67 V A -0.8691
68 D A -1.7014
69 Y A 0.0000
70 T A -0.9145
71 I A 0.0000
72 T A -0.5064
73 V A 0.0000
74 Y A -0.4128
75 A A 0.0000
76 V A 0.0000
77 G A 0.5156
78 W A 1.7759
79 W A 2.3769
80 Y A 1.9734
81 P A 0.6655
82 G A 0.3368
83 W A 1.1659
84 H A 0.1754
85 G A 0.3892
86 Y A 0.9945
87 T A 0.0830
88 R A -1.0038
89 S A -0.3762
90 P A -0.4515
91 I A -0.0533
92 S A -0.3869
93 I A -0.5620
94 N A -1.7353
95 Y A -1.4343
96 R A -2.3260
97 T A -1.1774
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Laboratory of Theory of Biopolymers 2018