| Chain sequence(s) |
C: GPSQVQLVESGGGLVQAGGSLRLSCAASGFPVSSSTMTWYRQAPGKEREWVAAINSYGYYTVYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDTGQMRESYDYWGQGTQVTVSA
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -2 | G | C | -1.0991 | |
| -1 | P | C | -0.9939 | |
| 0 | S | C | -1.2945 | |
| 1 | Q | C | -1.8549 | |
| 2 | V | C | -1.1597 | |
| 3 | Q | C | -1.2330 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.5213 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.6907 | |
| 8 | G | C | -1.2350 | |
| 9 | G | C | -0.7766 | |
| 10 | G | C | 0.1288 | |
| 11 | L | C | 1.0398 | |
| 12 | V | C | 0.2042 | |
| 13 | Q | C | -1.1250 | |
| 14 | A | C | -1.3013 | |
| 15 | G | C | -1.2469 | |
| 16 | G | C | -0.8325 | |
| 17 | S | C | -1.2792 | |
| 18 | L | C | -1.0332 | |
| 19 | R | C | -2.2849 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.5038 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.2230 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.8443 | |
| 26 | G | C | -1.2627 | |
| 27 | F | C | -0.5960 | |
| 28 | P | C | -0.8002 | |
| 29 | V | C | 0.0000 | |
| 30 | S | C | -0.5208 | |
| 31 | S | C | -0.1733 | |
| 32 | S | C | -0.4144 | |
| 33 | T | C | -0.1118 | |
| 34 | M | C | 0.0000 | |
| 35 | T | C | 0.1899 | |
| 36 | W | C | 0.0000 | |
| 37 | Y | C | 0.0436 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -1.8162 | |
| 40 | A | C | -1.8089 | |
| 41 | P | C | -1.3630 | |
| 42 | G | C | -1.9144 | |
| 43 | K | C | -3.2798 | |
| 44 | E | C | -3.4837 | |
| 45 | R | C | -2.5017 | |
| 46 | E | C | -2.1191 | |
| 47 | W | C | -0.1169 | |
| 48 | V | C | 0.0000 | |
| 49 | A | C | 0.0000 | |
| 50 | A | C | 0.5972 | |
| 51 | I | C | 0.0000 | |
| 52 | N | C | 0.9635 | |
| 53 | S | C | 0.6452 | |
| 54 | Y | C | 1.6579 | |
| 55 | G | C | 1.0224 | |
| 56 | Y | C | 2.2372 | |
| 57 | Y | C | 2.2685 | |
| 58 | T | C | 1.3722 | |
| 59 | V | C | 1.0425 | |
| 60 | Y | C | -0.3764 | |
| 61 | A | C | -1.2023 | |
| 62 | D | C | -2.3669 | |
| 63 | S | C | -1.8188 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.4655 | |
| 66 | G | C | -1.8251 | |
| 67 | R | C | -1.8116 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.9381 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.4693 | |
| 72 | R | C | -1.1966 | |
| 73 | D | C | -1.8095 | |
| 74 | N | C | -2.2886 | |
| 75 | A | C | -1.6752 | |
| 76 | K | C | -2.3896 | |
| 77 | N | C | -1.8576 | |
| 78 | T | C | 0.0000 | |
| 79 | V | C | 0.0000 | |
| 80 | Y | C | -0.7000 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.7452 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.5852 | |
| 85 | S | C | -1.2279 | |
| 86 | L | C | 0.0000 | |
| 87 | K | C | -2.1636 | |
| 88 | P | C | -1.7507 | |
| 89 | E | C | -2.2486 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.8629 | |
| 92 | A | C | 0.0000 | |
| 93 | V | C | -0.4458 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.1680 | |
| 96 | C | C | 0.0000 | |
| 97 | N | C | 0.0000 | |
| 98 | V | C | 0.0000 | |
| 99 | K | C | -0.8133 | |
| 100 | D | C | -1.1820 | |
| 101 | T | C | -1.4649 | |
| 102 | G | C | -1.5331 | |
| 103 | Q | C | -1.8856 | |
| 104 | M | C | -1.0073 | |
| 105 | R | C | -2.5955 | |
| 106 | E | C | -2.5836 | |
| 107 | S | C | -1.4497 | |
| 108 | Y | C | 0.0803 | |
| 109 | D | C | -0.1043 | |
| 110 | Y | C | 0.1878 | |
| 111 | W | C | 0.4533 | |
| 112 | G | C | -0.1096 | |
| 113 | Q | C | -1.0141 | |
| 114 | G | C | 0.0000 | |
| 115 | T | C | 0.0000 | |
| 116 | Q | C | -1.1628 | |
| 117 | V | C | 0.0000 | |
| 118 | T | C | -0.2994 | |
| 119 | V | C | 0.0000 | |
| 120 | S | C | -0.7975 | |
| 121 | A | C | -0.8399 |