Project name: query_structure

Status: done

Started: 2026-03-16 23:29:46
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Chain sequence(s) C: GPSQVQLVESGGGLVQAGGSLRLSCAASGFPVSSSTMTWYRQAPGKEREWVAAINSYGYYTVYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDTGQMRESYDYWGQGTQVTVSA
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.4837
Maximal score value
2.2685
Average score
-0.6817
Total score value
-84.5344

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-2 G C -1.0991
-1 P C -0.9939
0 S C -1.2945
1 Q C -1.8549
2 V C -1.1597
3 Q C -1.2330
4 L C 0.0000
5 V C 0.5213
6 E C 0.0000
7 S C -0.6907
8 G C -1.2350
9 G C -0.7766
10 G C 0.1288
11 L C 1.0398
12 V C 0.2042
13 Q C -1.1250
14 A C -1.3013
15 G C -1.2469
16 G C -0.8325
17 S C -1.2792
18 L C -1.0332
19 R C -2.2849
20 L C 0.0000
21 S C -0.5038
22 C C 0.0000
23 A C -0.2230
24 A C 0.0000
25 S C -0.8443
26 G C -1.2627
27 F C -0.5960
28 P C -0.8002
29 V C 0.0000
30 S C -0.5208
31 S C -0.1733
32 S C -0.4144
33 T C -0.1118
34 M C 0.0000
35 T C 0.1899
36 W C 0.0000
37 Y C 0.0436
38 R C 0.0000
39 Q C -1.8162
40 A C -1.8089
41 P C -1.3630
42 G C -1.9144
43 K C -3.2798
44 E C -3.4837
45 R C -2.5017
46 E C -2.1191
47 W C -0.1169
48 V C 0.0000
49 A C 0.0000
50 A C 0.5972
51 I C 0.0000
52 N C 0.9635
53 S C 0.6452
54 Y C 1.6579
55 G C 1.0224
56 Y C 2.2372
57 Y C 2.2685
58 T C 1.3722
59 V C 1.0425
60 Y C -0.3764
61 A C -1.2023
62 D C -2.3669
63 S C -1.8188
64 V C 0.0000
65 K C -2.4655
66 G C -1.8251
67 R C -1.8116
68 F C 0.0000
69 T C -0.9381
70 I C 0.0000
71 S C -0.4693
72 R C -1.1966
73 D C -1.8095
74 N C -2.2886
75 A C -1.6752
76 K C -2.3896
77 N C -1.8576
78 T C 0.0000
79 V C 0.0000
80 Y C -0.7000
81 L C 0.0000
82 Q C -1.7452
83 M C 0.0000
84 N C -1.5852
85 S C -1.2279
86 L C 0.0000
87 K C -2.1636
88 P C -1.7507
89 E C -2.2486
90 D C 0.0000
91 T C -0.8629
92 A C 0.0000
93 V C -0.4458
94 Y C 0.0000
95 Y C 0.1680
96 C C 0.0000
97 N C 0.0000
98 V C 0.0000
99 K C -0.8133
100 D C -1.1820
101 T C -1.4649
102 G C -1.5331
103 Q C -1.8856
104 M C -1.0073
105 R C -2.5955
106 E C -2.5836
107 S C -1.4497
108 Y C 0.0803
109 D C -0.1043
110 Y C 0.1878
111 W C 0.4533
112 G C -0.1096
113 Q C -1.0141
114 G C 0.0000
115 T C 0.0000
116 Q C -1.1628
117 V C 0.0000
118 T C -0.2994
119 V C 0.0000
120 S C -0.7975
121 A C -0.8399
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Laboratory of Theory of Biopolymers 2018