| Chain sequence(s) |
L: KLKNKYDAWYVD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 304 | K | L | -1.4695 | |
| 305 | L | L | 0.9494 | |
| 306 | K | L | -1.6515 | |
| 307 | N | L | -2.0151 | |
| 308 | K | L | -1.4222 | |
| 309 | Y | L | 0.8180 | |
| 310 | D | L | -1.4096 | |
| 311 | A | L | -0.1513 | |
| 312 | W | L | 1.2402 | |
| 313 | Y | L | 1.6041 | |
| 314 | V | L | 1.6898 | |
| 315 | D | L | -1.4711 |