| Chain sequence(s) |
H: PVQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSYNQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYCARSTYYGGDWYFNVWGAGTTVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
L: VLSQSPAILSASPGEKVTMTCRASSSVSYIHWFQQKPGSSPKPWIYATSNLASGVPVRFSGSSGSGTSYSLTISRVEAEDAATYYCQQWTSNPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADDYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:04)
[INFO] Main: Simulation completed successfully. (00:07:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | V | L | 1.3595 | |
| 4 | L | L | 0.1525 | |
| 5 | S | L | -0.6747 | |
| 6 | Q | L | -0.8151 | |
| 7 | S | L | -0.3953 | |
| 8 | P | L | 0.2275 | |
| 9 | A | L | 0.4282 | |
| 10 | I | L | 1.2971 | |
| 11 | L | L | 0.5027 | |
| 12 | S | L | -0.4597 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -2.2108 | |
| 15 | P | L | -2.4413 | |
| 16 | G | L | -3.0180 | |
| 17 | E | L | -3.5741 | |
| 18 | K | L | -3.4628 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4613 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.7151 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.8426 | |
| 25 | A | L | -0.6234 | |
| 26 | S | L | -0.2033 | |
| 27 | S | L | -0.3514 | |
| 28 | S | L | -0.6785 | |
| 29 | V | L | -0.3375 | |
| 30 | S | L | -0.2126 | |
| 31 | Y | L | 0.0465 | |
| 32 | I | L | 0.0000 | |
| 33 | H | L | 0.0000 | |
| 34 | W | L | 0.0000 | |
| 35 | F | L | 0.0000 | |
| 36 | Q | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | K | L | -1.5525 | |
| 39 | P | L | -1.1306 | |
| 40 | G | L | -0.9949 | |
| 41 | S | L | -0.7698 | |
| 42 | S | L | -0.5206 | |
| 43 | P | L | 0.0000 | |
| 44 | K | L | -1.2069 | |
| 45 | P | L | 0.0000 | |
| 46 | W | L | -0.2680 | |
| 47 | I | L | 0.0000 | |
| 48 | Y | L | 0.3310 | |
| 49 | A | L | 0.0000 | |
| 50 | T | L | -0.2326 | |
| 51 | S | L | -0.3208 | |
| 52 | N | L | -0.0947 | |
| 53 | L | L | 0.4519 | |
| 54 | A | L | 0.0000 | |
| 55 | S | L | -0.3530 | |
| 56 | G | L | -0.2762 | |
| 57 | V | L | 0.0000 | |
| 58 | P | L | 0.5826 | |
| 59 | V | L | 1.5671 | |
| 60 | R | L | -0.2576 | |
| 61 | F | L | 0.0000 | |
| 62 | S | L | 0.0093 | |
| 63 | G | L | -0.3482 | |
| 64 | S | L | -0.5610 | |
| 65 | G | L | -0.7875 | |
| 66 | S | L | -0.7062 | |
| 67 | G | L | -0.6845 | |
| 68 | T | L | -0.9554 | |
| 69 | S | L | -1.1517 | |
| 70 | Y | L | 0.0000 | |
| 71 | S | L | -0.6306 | |
| 72 | L | L | 0.0000 | |
| 73 | T | L | -0.7704 | |
| 74 | I | L | 0.0000 | |
| 75 | S | L | -2.0492 | |
| 76 | R | L | -3.6275 | |
| 77 | V | L | 0.0000 | |
| 78 | E | L | -3.1968 | |
| 79 | A | L | -2.5621 | |
| 80 | E | L | -2.9121 | |
| 81 | D | L | 0.0000 | |
| 82 | A | L | -1.8534 | |
| 83 | A | L | 0.0000 | |
| 84 | T | L | 0.0000 | |
| 85 | Y | L | 0.0000 | |
| 86 | Y | L | 0.0000 | |
| 87 | C | L | 0.0000 | |
| 88 | Q | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | W | L | -0.0609 | |
| 91 | T | L | -0.3342 | |
| 92 | S | L | -0.6956 | |
| 93 | N | L | -1.5091 | |
| 94 | P | L | -0.9176 | |
| 95 | P | L | 0.0000 | |
| 96 | T | L | 0.1362 | |
| 97 | F | L | 0.0000 | |
| 98 | G | L | 0.0000 | |
| 99 | G | L | -0.9121 | |
| 100 | G | L | -0.4528 | |
| 101 | T | L | 0.0000 | |
| 102 | K | L | -0.8677 | |
| 103 | L | L | 0.0000 | |
| 104 | E | L | -1.0562 | |
| 105 | I | L | 0.0000 | |
| 106 | K | L | -1.6888 | |
| 107 | R | L | -1.0606 | |
| 108 | T | L | 0.1813 | |
| 109 | V | L | 1.0761 | |
| 110 | A | L | 0.3552 | |
| 111 | A | L | 0.0956 | |
| 112 | P | L | 0.0000 | |
| 113 | S | L | -0.0884 | |
| 114 | V | L | -0.1647 | |
| 115 | F | L | 0.0000 | |
| 116 | I | L | 0.0000 | |
| 117 | F | L | 0.0000 | |
| 118 | P | L | -0.6432 | |
| 119 | P | L | -1.0989 | |
| 120 | S | L | -1.7324 | |
| 121 | D | L | -3.1096 | |
| 122 | E | L | -3.2866 | |
| 123 | Q | L | 0.0000 | |
| 124 | L | L | -2.2041 | |
| 125 | K | L | -2.9631 | |
| 126 | S | L | -1.8557 | |
| 127 | G | L | -1.5060 | |
| 128 | T | L | -1.3664 | |
| 129 | A | L | 0.0000 | |
| 130 | S | L | 0.0000 | |
| 131 | V | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | C | L | 0.0000 | |
| 134 | L | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | N | L | 0.0000 | |
| 137 | N | L | -0.7304 | |
| 138 | F | L | 0.0000 | |
| 139 | Y | L | 0.0000 | |
| 140 | P | L | -1.2678 | |
| 141 | R | L | -2.0748 | |
| 142 | E | L | -2.8199 | |
| 143 | A | L | -2.0476 | |
| 144 | K | L | -2.1576 | |
| 145 | V | L | -1.1780 | |
| 146 | Q | L | -0.7639 | |
| 147 | W | L | 0.0000 | |
| 148 | K | L | -0.7719 | |
| 149 | V | L | 0.0000 | |
| 150 | D | L | -1.8341 | |
| 151 | N | L | -1.6284 | |
| 152 | A | L | -0.4629 | |
| 153 | L | L | 0.2972 | |
| 154 | Q | L | -0.3781 | |
| 155 | S | L | -0.4966 | |
| 156 | G | L | -0.8777 | |
| 157 | N | L | -0.7691 | |
| 158 | S | L | -1.1286 | |
| 159 | Q | L | -1.3536 | |
| 160 | E | L | -1.7476 | |
| 161 | S | L | -0.5224 | |
| 162 | V | L | -0.4535 | |
| 163 | T | L | -0.7500 | |
| 164 | E | L | -1.8092 | |
| 165 | Q | L | -1.8448 | |
| 166 | D | L | -2.0066 | |
| 167 | S | L | -2.4415 | |
| 168 | K | L | -2.7886 | |
| 169 | D | L | -2.0436 | |
| 170 | S | L | 0.0000 | |
| 171 | T | L | 0.0000 | |
| 172 | Y | L | 0.0000 | |
| 173 | S | L | 0.0000 | |
| 174 | L | L | 0.0000 | |
| 175 | S | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | T | L | -0.6925 | |
| 178 | L | L | 0.0000 | |
| 179 | T | L | -0.4927 | |
| 180 | L | L | -0.8206 | |
| 181 | S | L | -1.2534 | |
| 182 | K | L | -2.2542 | |
| 183 | A | L | -2.0649 | |
| 184 | D | L | -3.1218 | |
| 185 | Y | L | 0.0000 | |
| 186 | E | L | -3.5315 | |
| 187 | K | L | -3.6763 | |
| 188 | H | L | -3.1232 | |
| 189 | K | L | -3.2914 | |
| 190 | V | L | -1.4848 | |
| 191 | Y | L | 0.0000 | |
| 192 | A | L | 0.0000 | |
| 193 | C | L | 0.0000 | |
| 194 | E | L | -0.7024 | |
| 195 | V | L | 0.0000 | |
| 196 | T | L | -1.1196 | |
| 197 | H | L | 0.0000 | |
| 198 | Q | L | -1.4977 | |
| 199 | G | L | -0.2093 | |
| 200 | L | L | -0.0791 | |
| 201 | S | L | -0.4116 | |
| 202 | S | L | -0.3842 | |
| 203 | P | L | -0.5321 | |
| 204 | V | L | 0.0621 | |
| 205 | T | L | -0.3759 | |
| 206 | K | L | -0.7120 | |
| 207 | S | L | -0.7056 | |
| 208 | F | L | -0.9945 | |
| 209 | N | L | -1.8413 | |
| 210 | R | L | -2.3675 | |
| 211 | G | L | -1.9587 | |
| 212 | E | L | -2.1834 | |
| 213 | C | L | -0.4112 | |
| 1 | P | H | -0.4145 | |
| 2 | V | H | -0.3070 | |
| 3 | Q | H | -1.5058 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0224 | |
| 6 | Q | H | -1.1585 | |
| 7 | P | H | -0.8679 | |
| 8 | G | H | -0.9651 | |
| 9 | A | H | 0.0000 | |
| 10 | E | H | -1.0937 | |
| 11 | L | H | -0.6001 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -1.9359 | |
| 14 | P | H | -1.2419 | |
| 15 | G | H | -1.1173 | |
| 16 | A | H | -0.9191 | |
| 17 | S | H | -1.0428 | |
| 18 | V | H | 0.0000 | |
| 19 | K | H | -1.6138 | |
| 20 | M | H | 0.0000 | |
| 21 | S | H | -0.8645 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -1.8828 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.0350 | |
| 26 | G | H | -0.6105 | |
| 27 | Y | H | -0.1180 | |
| 28 | T | H | 0.0305 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -0.6905 | |
| 31 | S | H | -0.0266 | |
| 32 | Y | H | 0.4199 | |
| 33 | N | H | -0.3992 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | K | H | -0.5331 | |
| 39 | Q | H | -0.7538 | |
| 40 | T | H | 0.0000 | |
| 41 | P | H | -1.0574 | |
| 42 | G | H | -1.6008 | |
| 43 | R | H | -2.3909 | |
| 44 | G | H | -1.5264 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.8451 | |
| 47 | W | H | 0.0000 | |
| 48 | I | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | A | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | Y | H | -0.9965 | |
| 53 | P | H | 0.0000 | |
| 54 | G | H | -1.3365 | |
| 55 | N | H | -2.2221 | |
| 56 | G | H | -2.2295 | |
| 57 | D | H | -2.3594 | |
| 58 | T | H | -1.1538 | |
| 59 | S | H | -0.7441 | |
| 60 | Y | H | -1.1898 | |
| 61 | N | H | 0.0000 | |
| 62 | Q | H | -2.7307 | |
| 63 | K | H | -2.9015 | |
| 64 | F | H | 0.0000 | |
| 65 | K | H | -2.8678 | |
| 66 | G | H | -1.9756 | |
| 67 | K | H | -1.4888 | |
| 68 | A | H | 0.0000 | |
| 69 | T | H | -0.8124 | |
| 70 | L | H | 0.0000 | |
| 71 | T | H | -0.7810 | |
| 72 | A | H | -1.3387 | |
| 73 | D | H | -1.8080 | |
| 74 | K | H | -2.4442 | |
| 75 | S | H | -1.3866 | |
| 76 | S | H | -1.2478 | |
| 77 | S | H | -1.2546 | |
| 78 | T | H | 0.0000 | |
| 79 | A | H | 0.0000 | |
| 80 | Y | H | -0.4608 | |
| 81 | M | H | 0.0000 | |
| 82 | Q | H | -1.1307 | |
| 83 | L | H | 0.0000 | |
| 84 | S | H | -0.8567 | |
| 85 | S | H | -0.8617 | |
| 86 | L | H | 0.0000 | |
| 87 | T | H | -1.2651 | |
| 88 | S | H | -1.4143 | |
| 89 | E | H | -1.9653 | |
| 90 | D | H | 0.0000 | |
| 91 | S | H | -0.7155 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.2434 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | S | H | 0.0000 | |
| 100 | T | H | 0.9377 | |
| 101 | Y | H | 1.6450 | |
| 102 | Y | H | 1.2058 | |
| 103 | G | H | 0.1108 | |
| 104 | G | H | 0.0179 | |
| 105 | D | H | 0.0000 | |
| 106 | W | H | 1.1281 | |
| 107 | Y | H | 0.0000 | |
| 108 | F | H | 0.0000 | |
| 109 | N | H | -0.1954 | |
| 110 | V | H | -0.2135 | |
| 111 | W | H | -0.3608 | |
| 112 | G | H | 0.0000 | |
| 113 | A | H | -0.4006 | |
| 114 | G | H | -0.2628 | |
| 115 | T | H | 0.0000 | |
| 116 | T | H | -0.2044 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | -0.6662 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.6874 | |
| 121 | A | H | -0.6491 | |
| 122 | A | H | -0.4013 | |
| 123 | S | H | -0.5476 | |
| 124 | T | H | -0.6761 | |
| 125 | K | H | -1.0932 | |
| 126 | G | H | -1.3312 | |
| 127 | P | H | -0.4969 | |
| 128 | S | H | -0.4895 | |
| 129 | V | H | 0.0000 | |
| 130 | F | H | 0.0000 | |
| 131 | P | H | -1.2038 | |
| 132 | L | H | 0.0000 | |
| 133 | A | H | -0.8688 | |
| 134 | P | H | 0.0000 | |
| 135 | S | H | -0.8561 | |
| 136 | S | H | -0.8932 | |
| 137 | K | H | -1.3776 | |
| 138 | S | H | 0.0000 | |
| 139 | T | H | -0.7764 | |
| 140 | S | H | -0.6927 | |
| 141 | G | H | -0.7933 | |
| 142 | G | H | -0.8626 | |
| 143 | T | H | -0.5738 | |
| 144 | A | H | 0.0000 | |
| 145 | A | H | 0.0000 | |
| 146 | L | H | 0.0000 | |
| 147 | G | H | 0.0000 | |
| 148 | C | H | 0.0000 | |
| 149 | L | H | 0.0000 | |
| 150 | V | H | 0.0000 | |
| 151 | K | H | 0.0000 | |
| 152 | D | H | -0.3366 | |
| 153 | Y | H | 0.0000 | |
| 154 | F | H | 0.0000 | |
| 155 | P | H | 0.0000 | |
| 156 | E | H | -0.7559 | |
| 157 | P | H | -0.9533 | |
| 158 | V | H | 0.0000 | |
| 159 | T | H | -0.7771 | |
| 160 | V | H | -0.3570 | |
| 161 | S | H | -0.5218 | |
| 162 | W | H | 0.0000 | |
| 163 | N | H | -0.8704 | |
| 164 | S | H | -0.7661 | |
| 165 | G | H | -0.5946 | |
| 166 | A | H | -0.2870 | |
| 167 | L | H | -0.0792 | |
| 168 | T | H | -0.2152 | |
| 169 | S | H | -0.2334 | |
| 170 | G | H | -0.3564 | |
| 171 | V | H | 0.1165 | |
| 172 | H | H | -0.2306 | |
| 173 | T | H | -0.1034 | |
| 174 | F | H | 0.0000 | |
| 175 | P | H | -0.2748 | |
| 176 | A | H | 0.2143 | |
| 177 | V | H | 0.5200 | |
| 178 | L | H | 1.2078 | |
| 179 | Q | H | 0.4195 | |
| 180 | S | H | -0.0077 | |
| 181 | S | H | -0.1552 | |
| 182 | G | H | 0.1376 | |
| 183 | L | H | 0.2015 | |
| 184 | Y | H | 0.4495 | |
| 185 | S | H | 0.0000 | |
| 186 | L | H | 0.0000 | |
| 187 | S | H | 0.0000 | |
| 188 | S | H | 0.0000 | |
| 189 | V | H | 0.0000 | |
| 190 | V | H | 0.0000 | |
| 191 | T | H | -0.1628 | |
| 192 | V | H | 0.0000 | |
| 193 | P | H | -0.5784 | |
| 194 | S | H | -0.6409 | |
| 195 | S | H | -0.5605 | |
| 196 | S | H | -0.5546 | |
| 197 | L | H | -0.7809 | |
| 198 | G | H | -0.9817 | |
| 199 | T | H | -0.7121 | |
| 200 | Q | H | -1.2426 | |
| 201 | T | H | -1.1319 | |
| 202 | Y | H | 0.0000 | |
| 203 | I | H | -1.4442 | |
| 204 | C | H | 0.0000 | |
| 205 | N | H | -1.7096 | |
| 206 | V | H | 0.0000 | |
| 207 | N | H | -2.1128 | |
| 208 | H | H | 0.0000 | |
| 209 | K | H | -2.2636 | |
| 210 | P | H | -1.4054 | |
| 211 | S | H | -1.6330 | |
| 212 | N | H | -2.3100 | |
| 213 | T | H | -2.2086 | |
| 214 | K | H | -2.7492 | |
| 215 | V | H | -1.9693 | |
| 216 | D | H | -2.7164 | |
| 217 | K | H | -2.1483 | |
| 218 | K | H | -2.4957 | |
| 219 | V | H | 0.0000 | |
| 220 | E | H | -2.4712 | |
| 221 | P | H | -1.2025 |