| Chain sequence(s) |
A: GFLPLNPEPEIKDTSEYVEETDLLFIAETDLITETGHPTADIVENGKVVVPKVSAYDFKVFKLTLPDPNTLPLPSKDFIDPSTEILIWRLKAIKIGIFGPLGKGEYGHPNFNRLGDVDNPTEPLHPGADDTVAYSWRPKRLQSYIIGDEPPLGKYTALAAPEPGLPPGARPPLEVVTDVIEHGDRADIGFGARDYAALEPRKNDVPDIIRDTKTKVIDYDGMAAEPYGRRMFTHNEYEKSSDSERLVRSGPDLEPLPASPPPSKLYERPPPSSPLAVPPPRRLFTLPDEGEIKESDELFNKPIFIEKTPGKNNGVLWHNQLYITVLDNSRAEIEEIKTKICTPEENVYNPDCYVTSKRYTREYKISLIIQLCRIPLTPETLEFLRRLDPSILVDANLPDVPPVERPDPYAGKKFIEIDLTNKLSTDLSSSELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.8547 | |
| 2 | F | A | 2.6092 | |
| 3 | L | A | 2.4467 | |
| 4 | P | A | 1.3274 | |
| 5 | L | A | 1.1994 | |
| 6 | N | A | -1.0313 | |
| 7 | P | A | -1.7855 | |
| 8 | E | A | -2.5781 | |
| 9 | P | A | -2.3436 | |
| 10 | E | A | -2.4013 | |
| 11 | I | A | -1.2576 | |
| 12 | K | A | -1.6345 | |
| 13 | D | A | -1.6358 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -2.2050 | |
| 16 | E | A | -2.4993 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.8979 | |
| 20 | E | A | -3.0370 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.9569 | |
| 23 | L | A | -0.6642 | |
| 24 | L | A | -0.1348 | |
| 25 | F | A | -0.0769 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0993 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3623 | |
| 31 | L | A | 0.3562 | |
| 32 | I | A | 0.1876 | |
| 33 | T | A | -0.1237 | |
| 34 | E | A | -0.4556 | |
| 35 | T | A | -0.4512 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.0597 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.7354 | |
| 40 | A | A | -0.3932 | |
| 41 | D | A | -0.5263 | |
| 42 | I | A | 0.8895 | |
| 43 | V | A | 0.8182 | |
| 44 | E | A | -1.5377 | |
| 45 | N | A | -2.1017 | |
| 46 | G | A | -1.3952 | |
| 47 | K | A | -1.2497 | |
| 48 | V | A | 1.0986 | |
| 49 | V | A | 1.2581 | |
| 50 | V | A | 0.7663 | |
| 51 | P | A | 0.0388 | |
| 52 | K | A | -0.7859 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.1389 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.6444 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8863 | |
| 70 | T | A | -0.4246 | |
| 71 | L | A | -0.0111 | |
| 72 | P | A | -0.3339 | |
| 73 | L | A | -0.4490 | |
| 74 | P | A | -0.7093 | |
| 75 | S | A | -1.4886 | |
| 76 | K | A | -2.6878 | |
| 77 | D | A | -2.7414 | |
| 78 | F | A | -1.4084 | |
| 79 | I | A | -1.4667 | |
| 80 | D | A | -2.0250 | |
| 81 | P | A | -1.3675 | |
| 82 | S | A | -0.8040 | |
| 83 | T | A | -0.7163 | |
| 84 | E | A | -0.8878 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | K | A | -1.0396 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | F | A | 0.5342 | |
| 99 | G | A | -0.3298 | |
| 100 | P | A | -0.3808 | |
| 101 | L | A | -0.5686 | |
| 102 | G | A | -1.0430 | |
| 103 | K | A | -2.0494 | |
| 104 | G | A | 0.0000 | |
| 105 | E | A | -2.6849 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.0126 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.7976 | |
| 110 | N | A | -1.7372 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.7216 | |
| 114 | L | A | -0.4257 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5692 | |
| 117 | V | A | -1.3293 | |
| 118 | D | A | -2.5301 | |
| 119 | N | A | -2.4968 | |
| 120 | P | A | -1.7385 | |
| 121 | T | A | -1.5324 | |
| 122 | E | A | -2.2364 | |
| 123 | P | A | -1.1682 | |
| 124 | L | A | -0.6934 | |
| 125 | H | A | -1.0920 | |
| 126 | P | A | -1.1354 | |
| 127 | G | A | -1.4107 | |
| 128 | A | A | -1.1522 | |
| 129 | D | A | -2.1952 | |
| 130 | D | A | -1.5806 | |
| 131 | T | A | -1.0601 | |
| 132 | V | A | -0.2511 | |
| 133 | A | A | -0.2017 | |
| 134 | Y | A | -0.0710 | |
| 135 | S | A | -0.7170 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -1.9472 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.4246 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.2231 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | 0.0732 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | 0.5062 | |
| 157 | A | A | 0.5599 | |
| 158 | L | A | 1.1030 | |
| 159 | A | A | 0.4559 | |
| 160 | A | A | -0.3370 | |
| 161 | P | A | -1.0443 | |
| 162 | E | A | -2.0108 | |
| 163 | P | A | -1.2536 | |
| 164 | G | A | -0.8228 | |
| 165 | L | A | -0.6074 | |
| 166 | P | A | -0.5304 | |
| 167 | P | A | -0.7379 | |
| 168 | G | A | -0.7515 | |
| 169 | A | A | -0.9012 | |
| 170 | R | A | -1.8136 | |
| 171 | P | A | -0.9516 | |
| 172 | P | A | -0.2381 | |
| 173 | L | A | 1.1476 | |
| 174 | E | A | 0.5677 | |
| 175 | V | A | 1.5180 | |
| 176 | V | A | 0.7903 | |
| 177 | T | A | 0.0918 | |
| 178 | D | A | -0.4322 | |
| 179 | V | A | 0.0000 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1924 | |
| 182 | H | A | -0.9092 | |
| 183 | G | A | -0.7293 | |
| 184 | D | A | -0.9323 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.1973 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.6989 | |
| 190 | F | A | -0.0332 | |
| 191 | G | A | -0.1990 | |
| 192 | A | A | -0.2640 | |
| 193 | R | A | -0.5127 | |
| 194 | D | A | -1.0552 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.5516 | |
| 197 | A | A | -0.3943 | |
| 198 | L | A | -0.5273 | |
| 199 | E | A | -1.7335 | |
| 200 | P | A | -1.9466 | |
| 201 | R | A | -2.8880 | |
| 202 | K | A | -3.2523 | |
| 203 | N | A | -2.2154 | |
| 204 | D | A | -1.5055 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.4747 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.3721 | |
| 211 | D | A | -2.2724 | |
| 212 | T | A | -1.6263 | |
| 213 | K | A | -1.8504 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.8349 | |
| 217 | I | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | Y | A | -0.6537 | |
| 220 | D | A | -1.7509 | |
| 221 | G | A | -1.0505 | |
| 222 | M | A | 0.0000 | |
| 223 | A | A | -0.7700 | |
| 224 | A | A | -0.6165 | |
| 225 | E | A | -0.8161 | |
| 226 | P | A | -0.5963 | |
| 227 | Y | A | -0.3028 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | -0.5160 | |
| 230 | R | A | -0.3646 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.5523 | |
| 234 | H | A | -1.0938 | |
| 235 | N | A | -1.6913 | |
| 236 | E | A | -2.5151 | |
| 237 | Y | A | -1.9352 | |
| 238 | E | A | -2.6632 | |
| 239 | K | A | -2.2501 | |
| 240 | S | A | -1.8232 | |
| 241 | S | A | -1.6589 | |
| 242 | D | A | -2.5684 | |
| 243 | S | A | -2.0912 | |
| 244 | E | A | -2.5035 | |
| 245 | R | A | -2.5999 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | S | A | -0.9170 | |
| 250 | G | A | -0.7816 | |
| 251 | P | A | -0.8615 | |
| 252 | D | A | -1.2114 | |
| 253 | L | A | -0.2559 | |
| 254 | E | A | -1.6833 | |
| 255 | P | A | -1.0423 | |
| 256 | L | A | -0.2708 | |
| 257 | P | A | -0.4391 | |
| 258 | A | A | -0.2972 | |
| 259 | S | A | -0.5147 | |
| 260 | P | A | -0.6585 | |
| 261 | P | A | -0.6539 | |
| 262 | P | A | -1.0001 | |
| 263 | S | A | -1.6724 | |
| 264 | K | A | -1.8839 | |
| 265 | L | A | -0.4585 | |
| 266 | Y | A | -1.1105 | |
| 267 | E | A | -2.7729 | |
| 268 | R | A | -2.5785 | |
| 269 | P | A | -1.2020 | |
| 270 | P | A | -1.0623 | |
| 271 | P | A | -0.4483 | |
| 272 | S | A | -0.3887 | |
| 273 | S | A | -0.1154 | |
| 274 | P | A | 0.1431 | |
| 275 | L | A | 0.6483 | |
| 276 | A | A | 0.4996 | |
| 277 | V | A | 1.4755 | |
| 278 | P | A | 0.2959 | |
| 279 | P | A | -0.1773 | |
| 280 | P | A | -0.6680 | |
| 281 | R | A | -0.9691 | |
| 282 | R | A | -0.2045 | |
| 283 | L | A | 0.8611 | |
| 284 | F | A | -0.0082 | |
| 285 | T | A | -0.9994 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.9640 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -1.8929 | |
| 291 | E | A | -2.3797 | |
| 292 | I | A | -1.9865 | |
| 293 | K | A | -3.0525 | |
| 294 | E | A | -2.7586 | |
| 295 | S | A | -1.8277 | |
| 296 | D | A | -1.5344 | |
| 297 | E | A | -1.3722 | |
| 298 | L | A | -1.0379 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3075 | |
| 301 | K | A | -1.8203 | |
| 302 | P | A | -1.0458 | |
| 303 | I | A | -0.2146 | |
| 304 | F | A | -0.2955 | |
| 305 | I | A | 0.0000 | |
| 306 | E | A | -2.1356 | |
| 307 | K | A | -2.5821 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -0.8717 | |
| 310 | G | A | -1.0653 | |
| 311 | K | A | -1.6943 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.4618 | |
| 319 | N | A | -0.5010 | |
| 320 | Q | A | -0.5586 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.9177 | |
| 333 | I | A | -2.4503 | |
| 334 | E | A | -3.0912 | |
| 335 | E | A | -2.6518 | |
| 336 | I | A | -0.6949 | |
| 337 | K | A | -1.2836 | |
| 338 | T | A | -0.2606 | |
| 339 | K | A | -0.5856 | |
| 340 | I | A | 1.4399 | |
| 341 | C | A | 0.5893 | |
| 342 | T | A | -0.2922 | |
| 343 | P | A | -1.1845 | |
| 344 | E | A | -2.3679 | |
| 345 | E | A | -2.6642 | |
| 346 | N | A | -1.6082 | |
| 347 | V | A | 0.2405 | |
| 348 | Y | A | 0.7277 | |
| 349 | N | A | -0.3981 | |
| 350 | P | A | -0.6112 | |
| 351 | D | A | -1.2354 | |
| 352 | C | A | 0.0000 | |
| 353 | Y | A | 0.4347 | |
| 354 | V | A | 0.9794 | |
| 355 | T | A | -0.4677 | |
| 356 | S | A | -0.9140 | |
| 357 | K | A | -2.1274 | |
| 358 | R | A | -1.8591 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.8017 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1593 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.7738 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.5535 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8277 | |
| 376 | L | A | -0.5961 | |
| 377 | T | A | -0.9529 | |
| 378 | P | A | -1.5292 | |
| 379 | E | A | -2.4737 | |
| 380 | T | A | -2.0610 | |
| 381 | L | A | -1.9626 | |
| 382 | E | A | -3.3232 | |
| 383 | F | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -3.1346 | |
| 386 | R | A | -2.6379 | |
| 387 | L | A | -1.3727 | |
| 388 | D | A | -1.2766 | |
| 389 | P | A | -1.6574 | |
| 390 | S | A | -0.8477 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.7755 | |
| 394 | D | A | -1.0986 | |
| 395 | A | A | -1.0036 | |
| 396 | N | A | -1.5375 | |
| 397 | L | A | -1.2293 | |
| 398 | P | A | -1.2966 | |
| 399 | D | A | -1.8466 | |
| 400 | V | A | -0.5389 | |
| 401 | P | A | -0.4114 | |
| 402 | P | A | -0.3920 | |
| 403 | V | A | 0.4513 | |
| 404 | E | A | -1.4979 | |
| 405 | R | A | -1.3806 | |
| 406 | P | A | -1.1706 | |
| 407 | D | A | -1.4259 | |
| 408 | P | A | -0.8444 | |
| 409 | Y | A | -0.8574 | |
| 410 | A | A | -0.9291 | |
| 411 | G | A | -1.2647 | |
| 412 | K | A | -1.7731 | |
| 413 | K | A | -2.3675 | |
| 414 | F | A | -1.3225 | |
| 415 | I | A | -1.0547 | |
| 416 | E | A | -2.1851 | |
| 417 | I | A | -1.6641 | |
| 418 | D | A | -2.4317 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3444 | |
| 421 | N | A | -1.8033 | |
| 422 | K | A | -1.6715 | |
| 423 | L | A | -0.6337 | |
| 424 | S | A | -0.7549 | |
| 425 | T | A | -0.6223 | |
| 426 | D | A | -1.7615 | |
| 427 | L | A | -1.1780 | |
| 428 | S | A | -1.5020 | |
| 429 | S | A | -1.4626 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.4929 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.9085 | |
| 435 | E | A | -2.3642 | |
| 436 | Y | A | -1.0667 | |
| 437 | L | A | -0.3967 | |
| 438 | N | A | -2.0441 | |
| 439 | R | A | -2.2327 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine