| Chain sequence(s) |
A: GCALMTPSAVDCKQDSDCLAGCVCLPGMVRCGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.4373 | |
| 2 | C | A | 1.7553 | |
| 3 | A | A | 1.2784 | |
| 4 | L | A | 2.0886 | |
| 5 | M | A | 1.8310 | |
| 6 | T | A | 0.9771 | |
| 7 | P | A | 0.1625 | |
| 8 | S | A | 0.0728 | |
| 9 | A | A | 0.0103 | |
| 10 | V | A | -0.3052 | |
| 11 | D | A | -2.1370 | |
| 12 | C | A | -2.0928 | |
| 13 | K | A | -3.0401 | |
| 14 | Q | A | -3.4569 | |
| 15 | D | A | -3.2354 | |
| 16 | S | A | -2.1845 | |
| 17 | D | A | -2.3323 | |
| 18 | C | A | -1.2901 | |
| 19 | L | A | 0.7743 | |
| 20 | A | A | 0.5584 | |
| 21 | G | A | 0.2138 | |
| 22 | C | A | 0.7352 | |
| 23 | V | A | 1.6858 | |
| 24 | C | A | 1.6594 | |
| 25 | L | A | 1.1210 | |
| 26 | P | A | 0.4315 | |
| 27 | G | A | 0.4967 | |
| 28 | M | A | 1.0439 | |
| 29 | V | A | 1.2117 | |
| 30 | R | A | -0.4148 | |
| 31 | C | A | 0.0327 | |
| 32 | G | A | 0.5492 | |
| 33 | S | A | 0.1859 |