| Chain sequence(s) |
A: FFKGHGG
C: FFKGHGG B: FFKGHGG D: FFKGHGG input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.1224 | |
| 2 | F | A | 0.3643 | |
| 3 | K | A | -1.3114 | |
| 4 | G | A | -2.3195 | |
| 5 | H | A | -2.1732 | |
| 6 | G | A | -0.8730 | |
| 7 | G | A | 0.2477 | |
| 1 | F | B | 2.0918 | |
| 2 | F | B | 0.2042 | |
| 3 | K | B | -1.7329 | |
| 4 | G | B | -2.2354 | |
| 5 | H | B | -2.3028 | |
| 6 | G | B | -0.6958 | |
| 7 | G | B | -0.0004 | |
| 1 | F | C | 2.1996 | |
| 2 | F | C | 0.5759 | |
| 3 | K | C | -1.1162 | |
| 4 | G | C | -2.1269 | |
| 5 | H | C | -2.0835 | |
| 6 | G | C | -1.0421 | |
| 7 | G | C | -0.0518 | |
| 1 | F | D | 2.0172 | |
| 2 | F | D | 0.0708 | |
| 3 | K | D | -1.6816 | |
| 4 | G | D | -2.3654 | |
| 5 | H | D | -2.2788 | |
| 6 | G | D | -0.7975 | |
| 7 | G | D | -0.0083 |