Project name: query_structure

Status: done

Started: 2026-03-17 00:16:08
Settings
Chain sequence(s) A: NCAKEGEVCGWGSKCCHGLDCPLAFIPYCEKYR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-3.7956
Maximal score value
3.6264
Average score
-0.6117
Total score value
-20.1871

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.3300
2 C A -0.7360
3 A A 0.0000
4 K A -3.1694
5 E A -3.7956
6 G A -2.4719
7 E A -2.1836
8 V A -0.2374
9 C A 0.0000
10 G A 1.1859
11 W A 1.5215
12 G A -0.3180
13 S A -1.0139
14 K A -1.8287
15 C A 0.0000
16 C A -0.8453
17 H A -1.2350
18 G A -1.4574
19 L A -2.3547
20 D A -2.0131
21 C A -1.0697
22 P A 0.5244
23 L A 2.0802
24 A A 2.5477
25 F A 3.4595
26 I A 3.6264
27 P A 0.0000
28 Y A -0.0713
29 C A 0.0000
30 E A -3.2773
31 K A -2.8300
32 Y A -1.0301
33 R A -1.8643
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Laboratory of Theory of Biopolymers 2018