| Chain sequence(s) |
H: EVRLVETGGGLVQPKGSLKLSCAASGFTFNNTAMNWVRQAPGKGLEWVARIRSKYNNYATYYADSLKARFTISRDDSQSMVYLQMNNLKTEDTAMYYCVRGGNPYAMDYWGQGTSVTVSS
L: DVVMTQSPDILYVTPGHRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:35)
[INFO] Main: Simulation completed successfully. (00:02:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1811 | |
| 2 | V | H | -1.4018 | |
| 3 | R | H | -1.6875 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0340 | |
| 6 | E | H | 0.0000 | |
| 7 | T | H | -0.0442 | |
| 8 | G | H | -0.5376 | |
| 9 | G | H | -0.2955 | |
| 11 | G | H | 0.3681 | |
| 12 | L | H | 1.1320 | |
| 13 | V | H | -0.1887 | |
| 14 | Q | H | -1.7151 | |
| 15 | P | H | -2.3449 | |
| 16 | K | H | -3.1019 | |
| 17 | G | H | -2.0901 | |
| 18 | S | H | -1.6645 | |
| 19 | L | H | -0.8106 | |
| 20 | K | H | -1.4056 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0665 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.1068 | |
| 25 | A | H | -0.3229 | |
| 26 | S | H | -0.8801 | |
| 27 | G | H | -1.2343 | |
| 28 | F | H | -0.6256 | |
| 29 | T | H | -0.5420 | |
| 30 | F | H | 0.0000 | |
| 35 | N | H | -1.4992 | |
| 36 | N | H | -1.6483 | |
| 37 | T | H | -1.1965 | |
| 38 | A | H | -1.0905 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.6095 | |
| 44 | Q | H | -0.9448 | |
| 45 | A | H | -1.2907 | |
| 46 | P | H | -1.0382 | |
| 47 | G | H | -1.4540 | |
| 48 | K | H | -2.1972 | |
| 49 | G | H | -1.2021 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9032 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | -0.2024 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.3959 | |
| 58 | S | H | 0.0000 | |
| 59 | K | H | -1.7524 | |
| 60 | Y | H | -0.2815 | |
| 61 | N | H | -1.1281 | |
| 62 | N | H | -1.4648 | |
| 63 | Y | H | -0.6865 | |
| 64 | A | H | -0.5458 | |
| 65 | T | H | -0.1353 | |
| 66 | Y | H | 0.2287 | |
| 67 | Y | H | -0.2976 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.3650 | |
| 70 | S | H | -1.5975 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.3129 | |
| 74 | A | H | -1.3210 | |
| 75 | R | H | -1.3115 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5675 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2406 | |
| 80 | R | H | 0.0000 | |
| 81 | D | H | -1.3401 | |
| 82 | D | H | -1.5713 | |
| 83 | S | H | -1.1779 | |
| 84 | Q | H | -1.5989 | |
| 85 | S | H | -0.9487 | |
| 86 | M | H | -0.4048 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.2802 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9836 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.9480 | |
| 93 | N | H | -2.8038 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.8801 | |
| 96 | T | H | -1.9596 | |
| 97 | E | H | -2.2861 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7429 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.1299 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | -0.4422 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | -0.7923 | |
| 109 | N | H | -1.4060 | |
| 110 | P | H | -0.9031 | |
| 113 | Y | H | -0.3855 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.4757 | |
| 117 | Y | H | -0.0663 | |
| 118 | W | H | -0.2345 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2119 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.2167 | |
| 123 | S | H | -0.2351 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1162 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8459 | |
| 128 | S | H | -0.6909 | |
| 1 | D | L | -1.3078 | |
| 2 | V | L | -0.0478 | |
| 3 | V | L | 0.8527 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6550 | |
| 6 | Q | L | -0.9189 | |
| 7 | S | L | -1.0216 | |
| 8 | P | L | -0.8354 | |
| 9 | D | L | -1.5337 | |
| 10 | I | L | 0.1302 | |
| 11 | L | L | 0.4952 | |
| 12 | Y | L | 0.9082 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.2616 | |
| 15 | P | L | -1.5004 | |
| 16 | G | L | -1.9052 | |
| 17 | H | L | -2.5469 | |
| 18 | R | L | -3.0388 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8050 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -1.0720 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3880 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9875 | |
| 27 | Q | L | -1.6866 | |
| 28 | S | L | -1.4776 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.9428 | |
| 37 | D | L | -1.0849 | |
| 38 | Y | L | -0.3233 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.8356 | |
| 45 | K | L | -1.2811 | |
| 46 | S | L | -1.0220 | |
| 47 | H | L | -1.7775 | |
| 48 | E | L | -1.9093 | |
| 49 | S | L | -1.2163 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.8724 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.6055 | |
| 56 | Y | L | -0.4357 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8441 | |
| 66 | Q | L | -1.0539 | |
| 67 | S | L | -0.6550 | |
| 68 | I | L | -0.3103 | |
| 69 | S | L | -0.3607 | |
| 70 | G | L | -0.4408 | |
| 71 | I | L | -0.2055 | |
| 72 | P | L | -0.2769 | |
| 74 | S | L | -0.5882 | |
| 75 | R | L | -1.1337 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7563 | |
| 78 | G | L | -0.5885 | |
| 79 | S | L | -0.8119 | |
| 80 | G | L | -1.1514 | |
| 83 | S | L | -1.1933 | |
| 84 | G | L | -1.3288 | |
| 85 | S | L | -1.9135 | |
| 86 | D | L | -2.3005 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8197 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.5269 | |
| 93 | S | L | -2.1991 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.8345 | |
| 96 | P | L | -1.5780 | |
| 97 | E | L | -2.0372 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.2150 | |
| 100 | G | L | 0.0000 | |
| 101 | V | L | -0.1008 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | N | L | 0.0000 | |
| 107 | G | L | 0.0326 | |
| 108 | H | L | -0.3218 | |
| 109 | S | L | 0.3329 | |
| 114 | F | L | 1.3107 | |
| 115 | P | L | 0.4072 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.2661 | |
| 118 | F | L | 0.3179 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.5275 | |
| 121 | G | L | -0.6961 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.5020 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | 0.2801 | |
| 126 | L | L | -0.3387 | |
| 127 | K | L | -1.2788 |