Project name: query_structure

Status: done

Started: 2026-03-17 00:24:34
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Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVHDINSYLSLEGFWVDHVYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:45)
Show buried residues

Minimal score value
-3.1728
Maximal score value
2.5949
Average score
-0.5676
Total score value
-72.651

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.2780
2 V A -0.4085
3 Q A -1.6074
4 L A 0.0000
5 Q A -1.6676
6 E A 0.0000
7 S A -1.1129
8 G A -1.0320
9 G A -0.8232
10 G A -0.0669
11 L A 1.0889
12 V A 0.2869
13 Q A -0.8002
14 A A -1.0949
15 G A -1.0489
16 G A -0.8127
17 S A -1.1680
18 L A -1.0072
19 R A -2.1342
20 L A 0.0000
21 S A -0.8678
22 C A 0.0000
23 A A -1.1933
24 A A -0.7228
25 S A -0.7237
26 G A -0.1361
27 Y A 0.4819
28 I A 0.0000
29 S A -1.2165
30 D A -1.8559
31 A A 0.0000
32 Y A -0.5528
33 Y A 0.0699
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A 0.0371
38 R A 0.0000
39 Q A -1.8084
40 A A -1.8332
41 P A -1.2932
42 G A -1.7589
43 K A -2.8451
44 E A -3.1728
45 R A -2.3223
46 E A -1.1248
47 F A 0.1927
48 V A 0.0000
49 A A 0.0000
50 T A 0.3868
51 I A 0.0000
52 T A 0.0000
53 H A -1.5442
54 G A -1.1088
55 T A -1.0578
56 N A -1.2690
57 T A -0.0833
58 Y A 0.7674
59 Y A -0.1086
60 A A -0.8867
61 D A -2.2357
62 S A -1.7510
63 V A 0.0000
64 K A -2.4544
65 G A -1.7770
66 R A -1.4816
67 F A 0.0000
68 T A -0.7160
69 I A 0.0000
70 S A -0.6470
71 R A -1.2197
72 D A -1.6839
73 N A -1.8467
74 A A -1.2684
75 K A -2.1220
76 N A -1.5961
77 T A 0.0000
78 V A 0.0000
79 Y A -0.6694
80 L A 0.0000
81 Q A -1.2377
82 M A 0.0000
83 N A -1.3798
84 S A -1.1731
85 L A 0.0000
86 K A -2.2355
87 P A -1.6153
88 E A -2.3075
89 D A 0.0000
90 T A -0.8989
91 A A 0.0000
92 V A -0.5912
93 Y A 0.0000
94 Y A -0.3778
95 C A 0.0000
96 A A 0.0000
97 V A 0.0000
98 H A -0.5063
99 D A -1.0899
100 I A -0.7559
101 N A -0.5751
102 S A 0.7382
103 Y A 2.3426
104 L A 2.5949
105 S A 1.7920
106 L A 1.4503
107 E A -0.1946
108 G A 0.9112
109 F A 2.3389
110 W A 1.8456
111 V A 0.8789
112 D A -1.3561
113 H A -1.1222
114 V A 0.2194
115 Y A 0.1523
116 W A 0.1746
117 G A -0.7899
118 Q A -1.5671
119 G A -0.9894
120 T A 0.0000
121 Q A -1.1818
122 V A 0.0000
123 T A -0.2411
124 V A 0.0000
125 S A -0.4923
126 S A -0.7056
127 L A 0.2569
128 E A -1.2568
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Laboratory of Theory of Biopolymers 2018