Project name: 2510-9.pdb

Status: done

Started: 2026-03-11 10:02:13
Settings
Chain sequence(s) H: QVQLQQSAAELARPGASVKMSCKASGYTFIKYTMHWVKQRPGQGLEWIGYINPSSGYIEYNQKFKDKTTLTADKSSSTAYMQLSSLTSEDSAVYYCARGTLLGLSWGQGTTLTVSA
L: DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:33)
Show buried residues

Minimal score value
-3.4637
Maximal score value
1.9733
Average score
-0.5514
Total score value
-122.9536

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2655
2 V H -0.4419
3 Q H -1.7565
4 L H 0.0000
5 Q H -2.0136
6 Q H 0.0000
7 S H -0.7619
8 A H -0.4853
9 A H -0.0322
11 E H -0.3498
12 L H 0.6787
13 A H -0.5344
14 R H -1.8180
15 P H -1.3863
16 G H -1.1219
17 A H -0.9807
18 S H -1.0125
19 V H 0.0000
20 K H -1.2313
21 M H 0.0000
22 S H -0.4880
23 C H 0.0000
24 K H -1.3470
25 A H 0.0000
26 S H -1.0101
27 G H -0.8290
28 Y H -0.3857
29 T H -0.3690
30 F H 0.0000
35 I H -0.5274
36 K H -1.2483
37 Y H -0.3817
38 T H -0.1132
39 M H 0.0000
40 H H -0.0524
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8494
45 R H -1.5158
46 P H -1.0781
47 G H -1.3491
48 Q H -1.8402
49 G H -1.1189
50 L H 0.0000
51 E H -0.8778
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 N H -0.0662
58 P H 0.0000
59 S H -0.5567
62 S H 0.1345
63 G H 0.0661
64 Y H 1.1618
65 I H 0.8800
66 E H 0.0786
67 Y H -0.8382
68 N H 0.0000
69 Q H -2.9283
70 K H -3.0524
71 F H 0.0000
72 K H -3.4637
74 D H -3.1750
75 K H -2.2107
76 T H 0.0000
77 T H -0.8002
78 L H 0.0000
79 T H -0.2095
80 A H -0.6754
81 D H -1.5355
82 K H -1.9405
83 S H -1.1771
84 S H -1.0233
85 S H -0.9968
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1235
89 M H 0.0000
90 Q H -0.8911
91 L H 0.0000
92 S H -1.0201
93 S H -1.0402
94 L H 0.0000
95 T H -1.3212
96 S H -1.3961
97 E H -2.0352
98 D H 0.0000
99 S H -0.7325
100 A H 0.0000
101 V H 0.0502
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.2440
108 T H 0.7830
109 L H 1.7846
114 L H 1.9733
115 G H 0.8689
116 L H 0.7012
117 S H -0.1963
118 W H -0.5492
119 G H 0.0000
120 Q H -1.7840
121 G H -0.6970
122 T H 0.0000
123 T H -0.1002
124 L H 0.0000
125 T H -0.2209
126 V H 0.0000
127 S H -0.5483
128 A H -0.5907
1 D L -2.2151
2 I L 0.0000
3 Q L -2.1954
4 M L 0.0000
5 T L -1.1373
6 Q L 0.0000
7 S L -0.5853
8 P L -0.4872
9 S L -0.6864
10 S L -0.9638
11 L L -0.4834
12 S L -0.6637
13 A L 0.0000
14 S L -0.6160
15 L L 0.2729
16 G L -1.1226
17 E L -2.1677
18 R L -2.4972
19 V L 0.0000
20 S L -0.6384
21 L L 0.0000
22 T L -0.8317
23 C L 0.0000
24 R L -2.8276
25 A L 0.0000
26 S L -2.2428
27 Q L -2.9016
28 E L -2.6771
29 I L 0.0000
36 S L -0.7783
37 G L -0.1522
38 Y L 0.8373
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.5114
46 P L -1.3673
47 D L -2.2382
48 G L -1.5026
49 T L -1.2473
50 I L 0.0000
51 K L -0.7489
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.8456
56 A L 0.6026
57 A L 0.0000
65 S L -0.2307
66 T L 0.2402
67 L L 0.1736
68 D L 0.1008
69 S L -0.1943
70 G L -0.6920
71 V L -0.5767
72 P L -1.0120
74 K L -1.7101
75 R L 0.0000
76 F L 0.0000
77 S L -0.4874
78 G L -0.4032
79 S L -0.9235
80 R L -1.6811
83 S L -1.2932
84 G L -1.4106
85 S L -1.9553
86 D L -1.6834
87 Y L 0.0000
88 S L -0.8524
89 L L 0.0000
90 T L -0.5951
91 I L 0.0000
92 S L -1.5613
93 S L -1.6119
94 L L 0.0000
95 E L -1.5553
96 S L -1.0274
97 E L -2.1661
98 D L 0.0000
99 F L -0.7691
100 A L 0.0000
101 D L -1.1223
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.7985
108 A L 0.0621
109 S L -0.1481
114 Y L 0.4310
115 P L -0.5011
116 L L 0.0000
117 T L -0.4568
118 F L -0.1375
119 G L 0.0000
120 A L -0.4191
121 G L 0.0000
122 T L 0.0000
123 K L -1.7490
124 L L 0.0000
125 E L -1.1322
126 L L 0.3427
127 K L -1.0522
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Laboratory of Theory of Biopolymers 2018