| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVIFYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYATYYASNSGWYEYTSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7659 | |
| 2 | S | A | 0.7521 | |
| 3 | S | A | 0.6969 | |
| 4 | V | A | 0.3269 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5826 | |
| 7 | K | A | -2.5713 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.8862 | |
| 10 | V | A | 0.1188 | |
| 11 | V | A | 1.5419 | |
| 12 | A | A | 0.8961 | |
| 13 | A | A | 0.3291 | |
| 14 | T | A | -0.1939 | |
| 15 | P | A | -0.7964 | |
| 16 | T | A | -0.5281 | |
| 17 | S | A | -0.3095 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7494 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9243 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.4627 | |
| 24 | A | A | -1.1580 | |
| 25 | P | A | 0.0665 | |
| 26 | A | A | 0.5070 | |
| 27 | V | A | 1.0229 | |
| 28 | T | A | 0.7723 | |
| 29 | V | A | 1.1727 | |
| 30 | I | A | 1.4261 | |
| 31 | F | A | 0.9829 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4127 | |
| 36 | Y | A | -0.2881 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5959 | |
| 39 | T | A | -1.5019 | |
| 40 | G | A | -1.3626 | |
| 41 | G | A | -1.5253 | |
| 42 | N | A | -1.5573 | |
| 43 | S | A | -0.8816 | |
| 44 | P | A | -0.3268 | |
| 45 | V | A | 0.4457 | |
| 46 | Q | A | -0.8329 | |
| 47 | E | A | -1.5353 | |
| 48 | F | A | -0.5363 | |
| 49 | T | A | -0.0810 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.3733 | |
| 52 | G | A | -0.1597 | |
| 53 | S | A | -0.8686 | |
| 54 | K | A | -1.9040 | |
| 55 | S | A | -1.3524 | |
| 56 | T | A | -0.7509 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2412 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4735 | |
| 61 | G | A | -0.6854 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.9398 | |
| 64 | P | A | -1.0811 | |
| 65 | G | A | -1.2477 | |
| 66 | V | A | -1.2606 | |
| 67 | D | A | -2.6207 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9428 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6648 | |
| 74 | A | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | Y | A | 1.8817 | |
| 77 | Y | A | 1.9622 | |
| 78 | A | A | 0.0000 | |
| 79 | S | A | -0.4149 | |
| 80 | N | A | -1.2329 | |
| 81 | S | A | -0.4931 | |
| 82 | G | A | -0.1361 | |
| 83 | W | A | 1.1618 | |
| 84 | Y | A | 1.7578 | |
| 85 | E | A | 0.9535 | |
| 86 | Y | A | 1.4358 | |
| 87 | T | A | 0.0000 | |
| 88 | S | A | 0.1364 | |
| 89 | P | A | 0.2479 | |
| 90 | I | A | 0.0813 | |
| 91 | S | A | -0.5100 | |
| 92 | I | A | -0.7205 | |
| 93 | N | A | -1.8953 | |
| 94 | Y | A | -1.6640 | |
| 95 | R | A | -2.6473 | |
| 96 | T | A | -1.3404 |