| Chain sequence(s) |
B: GSSPSGVQRPVINSETGTVTVTMNMSDVSSATFVWTSGGEVIATSKVVSV
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.6546 | |
| 2 | S | B | -0.6516 | |
| 3 | S | B | -0.6670 | |
| 4 | P | B | -1.0480 | |
| 5 | S | B | -0.9422 | |
| 6 | G | B | -1.2225 | |
| 7 | V | B | -0.6762 | |
| 8 | Q | B | -1.5507 | |
| 9 | R | B | -1.4815 | |
| 10 | P | B | 0.4465 | |
| 11 | V | B | 1.9684 | |
| 12 | I | B | 1.6548 | |
| 13 | N | B | -0.1969 | |
| 14 | S | B | -0.9390 | |
| 15 | E | B | -2.1142 | |
| 16 | T | B | -1.1839 | |
| 17 | G | B | -0.9457 | |
| 18 | T | B | 0.1570 | |
| 19 | V | B | 1.5716 | |
| 20 | T | B | 1.0815 | |
| 21 | V | B | 0.9946 | |
| 22 | T | B | -0.1433 | |
| 23 | M | B | -0.6820 | |
| 24 | N | B | -1.5372 | |
| 25 | M | B | -0.2579 | |
| 26 | S | B | -1.1919 | |
| 27 | D | B | -1.7798 | |
| 28 | V | B | 0.0000 | |
| 29 | S | B | -0.1287 | |
| 30 | S | B | 0.6127 | |
| 31 | A | B | -0.0214 | |
| 32 | T | B | 0.0977 | |
| 33 | F | B | 0.9631 | |
| 34 | V | B | 2.2921 | |
| 35 | W | B | 2.0757 | |
| 36 | T | B | 0.8523 | |
| 37 | S | B | -0.1784 | |
| 38 | G | B | -0.9443 | |
| 39 | G | B | -1.0291 | |
| 40 | E | B | -0.8051 | |
| 41 | V | B | 1.7347 | |
| 42 | I | B | 2.4468 | |
| 43 | A | B | 1.8712 | |
| 44 | T | B | 1.1259 | |
| 45 | S | B | -0.0759 | |
| 46 | K | B | -0.9076 | |
| 47 | V | B | 0.5417 | |
| 48 | V | B | 1.7791 | |
| 49 | S | B | 1.4275 | |
| 50 | V | B | 2.2002 |