| Chain sequence(s) |
A: ECRYWLGGCSAGQTCCKHLVCSRRHGWCVWDGTFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.8041 | |
| 2 | C | A | -1.0463 | |
| 3 | R | A | -0.3820 | |
| 4 | Y | A | 1.2166 | |
| 5 | W | A | 1.7984 | |
| 6 | L | A | 1.8210 | |
| 7 | G | A | 0.8105 | |
| 8 | G | A | 0.0972 | |
| 9 | C | A | -0.2641 | |
| 10 | S | A | -0.7756 | |
| 11 | A | A | -0.6555 | |
| 12 | G | A | -0.7666 | |
| 13 | Q | A | -1.1496 | |
| 14 | T | A | -0.7249 | |
| 15 | C | A | -0.2902 | |
| 16 | C | A | 0.0000 | |
| 17 | K | A | -1.9385 | |
| 18 | H | A | -1.5930 | |
| 19 | L | A | -0.1325 | |
| 20 | V | A | 0.0923 | |
| 21 | C | A | -0.3027 | |
| 22 | S | A | -1.1010 | |
| 23 | R | A | -2.8122 | |
| 24 | R | A | -2.9553 | |
| 25 | H | A | -1.5012 | |
| 26 | G | A | -1.4130 | |
| 27 | W | A | 0.2720 | |
| 28 | C | A | 0.0000 | |
| 29 | V | A | 0.0000 | |
| 30 | W | A | 0.8188 | |
| 31 | D | A | -0.8618 | |
| 32 | G | A | -0.5601 | |
| 33 | T | A | 0.0731 | |
| 34 | F | A | 0.8636 | |
| 35 | S | A | 0.0044 |