| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAVERNSGDLQLPQEIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEKSLRVDALITATIEGRKVMLYTQKVRHFKEVDEPNALHLWVTDNNRTFHLGPFSVDSAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:33)
[INFO] Main: Simulation completed successfully. (00:06:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7673 | |
| 2 | G | A | -0.1829 | |
| 3 | S | A | -0.6763 | |
| 4 | S | A | -1.1397 | |
| 5 | H | A | -1.9123 | |
| 6 | H | A | -2.4053 | |
| 7 | H | A | -2.5852 | |
| 8 | H | A | -2.4844 | |
| 9 | H | A | -2.4357 | |
| 10 | H | A | -2.0925 | |
| 11 | S | A | -1.5991 | |
| 12 | S | A | -1.5625 | |
| 13 | G | A | -1.7572 | |
| 14 | E | A | -2.0961 | |
| 15 | N | A | -0.9394 | |
| 16 | L | A | 1.2705 | |
| 17 | Y | A | 1.8750 | |
| 18 | F | A | 2.2312 | |
| 19 | Q | A | 0.2951 | |
| 20 | G | A | -0.2137 | |
| 21 | A | A | -0.0898 | |
| 22 | M | A | 1.0100 | |
| 23 | A | A | 0.3612 | |
| 24 | V | A | 0.6644 | |
| 25 | E | A | -2.0278 | |
| 26 | R | A | -3.0010 | |
| 27 | N | A | -2.5922 | |
| 28 | S | A | -1.7445 | |
| 29 | G | A | -1.6363 | |
| 30 | D | A | -1.5810 | |
| 31 | L | A | 0.0584 | |
| 32 | Q | A | -1.0459 | |
| 33 | L | A | -0.3872 | |
| 34 | P | A | -1.0562 | |
| 35 | Q | A | -1.6652 | |
| 36 | E | A | -1.8404 | |
| 37 | I | A | -0.6091 | |
| 38 | A | A | -0.0654 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -0.2623 | |
| 42 | P | A | -1.1313 | |
| 43 | N | A | -2.1414 | |
| 44 | K | A | -2.4059 | |
| 45 | T | A | 0.0000 | |
| 46 | Q | A | -2.0755 | |
| 47 | V | A | 0.0000 | |
| 48 | V | A | -1.5328 | |
| 49 | P | A | -1.7392 | |
| 50 | K | A | -1.4429 | |
| 51 | S | A | -1.2800 | |
| 52 | G | A | -1.4262 | |
| 53 | G | A | -1.9866 | |
| 54 | E | A | -2.7814 | |
| 55 | G | A | -2.3852 | |
| 56 | K | A | -2.6030 | |
| 57 | V | A | -1.2127 | |
| 58 | K | A | 0.0000 | |
| 59 | D | A | -1.2306 | |
| 60 | I | A | -0.8481 | |
| 61 | F | A | 0.0000 | |
| 62 | A | A | 0.0081 | |
| 63 | S | A | 0.0305 | |
| 64 | P | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -0.9519 | |
| 69 | A | A | 0.0000 | |
| 70 | G | A | -1.3699 | |
| 71 | G | A | -1.2373 | |
| 72 | V | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | R | A | -0.6546 | |
| 81 | T | A | -1.2272 | |
| 82 | K | A | -1.7150 | |
| 83 | N | A | -1.7291 | |
| 84 | K | A | -2.0042 | |
| 85 | L | A | -0.7964 | |
| 86 | F | A | 0.0000 | |
| 87 | P | A | -1.2408 | |
| 88 | E | A | -1.4859 | |
| 89 | V | A | 0.2606 | |
| 90 | I | A | 0.6469 | |
| 91 | D | A | -1.5724 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | -0.8193 | |
| 97 | I | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | K | A | -0.9404 | |
| 104 | A | A | -0.9244 | |
| 105 | P | A | 0.0000 | |
| 106 | E | A | -2.3699 | |
| 107 | T | A | -1.2532 | |
| 108 | W | A | -1.0724 | |
| 109 | Q | A | -1.3107 | |
| 110 | S | A | -1.0153 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | -0.2823 | |
| 113 | A | A | -0.5618 | |
| 114 | E | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.5656 | |
| 117 | K | A | -1.1902 | |
| 118 | E | A | -1.5789 | |
| 119 | Y | A | -0.0392 | |
| 120 | W | A | -0.4873 | |
| 121 | Q | A | -1.0063 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -1.7323 | |
| 128 | S | A | -1.3131 | |
| 129 | A | A | -1.3955 | |
| 130 | N | A | -2.4045 | |
| 131 | N | A | -2.6181 | |
| 132 | S | A | -2.2179 | |
| 133 | N | A | -2.3347 | |
| 134 | H | A | -1.7898 | |
| 135 | R | A | -2.6868 | |
| 136 | V | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | V | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | R | A | -0.3916 | |
| 141 | L | A | -0.0134 | |
| 142 | P | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | T | A | -1.0213 | |
| 147 | R | A | -1.8869 | |
| 148 | G | A | -1.6500 | |
| 149 | N | A | -1.9385 | |
| 150 | K | A | -2.2732 | |
| 151 | V | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | S | A | -0.6950 | |
| 158 | Y | A | -0.9968 | |
| 159 | E | A | -1.7995 | |
| 160 | E | A | -1.9390 | |
| 161 | R | A | -2.2272 | |
| 162 | R | A | -1.3948 | |
| 163 | E | A | -1.3008 | |
| 164 | I | A | 0.3510 | |
| 165 | D | A | -1.5859 | |
| 166 | D | A | -1.4919 | |
| 167 | Y | A | 0.5614 | |
| 168 | I | A | 0.2227 | |
| 169 | W | A | -0.6874 | |
| 170 | K | A | -1.8811 | |
| 171 | A | A | -1.6333 | |
| 172 | E | A | -2.1207 | |
| 173 | A | A | -1.1720 | |
| 174 | W | A | -1.1691 | |
| 175 | N | A | -1.4983 | |
| 176 | I | A | 0.0000 | |
| 177 | K | A | -0.8819 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.0000 | |
| 180 | E | A | -1.3327 | |
| 181 | G | A | 0.0000 | |
| 182 | E | A | -2.4193 | |
| 183 | A | A | 0.0000 | |
| 184 | T | A | -1.7016 | |
| 185 | Q | A | -1.7726 | |
| 186 | S | A | -1.2815 | |
| 187 | T | A | -1.0174 | |
| 188 | E | A | -1.6363 | |
| 189 | V | A | 0.2894 | |
| 190 | Q | A | -1.1107 | |
| 191 | P | A | -1.2399 | |
| 192 | T | A | -0.6446 | |
| 193 | Q | A | -0.9308 | |
| 194 | P | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.8343 | |
| 197 | W | A | -1.5483 | |
| 198 | S | A | -1.5942 | |
| 199 | E | A | -2.0905 | |
| 200 | P | A | -1.3502 | |
| 201 | K | A | -1.3810 | |
| 202 | P | A | -1.0553 | |
| 203 | L | A | 0.0000 | |
| 204 | F | A | -1.2509 | |
| 205 | Q | A | -2.0651 | |
| 206 | T | A | -1.5925 | |
| 207 | D | A | -2.6107 | |
| 208 | S | A | -2.4911 | |
| 209 | P | A | -2.5103 | |
| 210 | N | A | -3.6173 | |
| 211 | N | A | -3.3846 | |
| 212 | K | A | -3.4023 | |
| 213 | G | A | -3.2013 | |
| 214 | D | A | -3.9600 | |
| 215 | L | A | -3.1370 | |
| 216 | K | A | -3.3848 | |
| 217 | E | A | -2.1204 | |
| 218 | F | A | 0.0000 | |
| 219 | L | A | -0.3563 | |
| 220 | G | A | 0.0000 | |
| 221 | G | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | S | A | 0.1284 | |
| 225 | G | A | 0.0000 | |
| 226 | I | A | 0.3821 | |
| 227 | V | A | 0.2578 | |
| 228 | M | A | 0.0000 | |
| 229 | G | A | -1.5316 | |
| 230 | N | A | -1.7142 | |
| 231 | G | A | -1.1352 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | P | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | T | A | -0.5611 | |
| 239 | A | A | 0.0000 | |
| 240 | K | A | -2.5072 | |
| 241 | D | A | -3.3839 | |
| 242 | E | A | -3.7062 | |
| 243 | S | A | -2.6041 | |
| 244 | N | A | -3.1208 | |
| 245 | K | A | -2.2780 | |
| 246 | V | A | 0.0000 | |
| 247 | F | A | -0.2152 | |
| 248 | S | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | 0.0000 | |
| 252 | Y | A | -0.6839 | |
| 253 | S | A | 0.0000 | |
| 254 | T | A | -1.7421 | |
| 255 | D | A | -2.2289 | |
| 256 | D | A | -2.9307 | |
| 257 | G | A | 0.0000 | |
| 258 | Q | A | -2.7599 | |
| 259 | K | A | -3.1448 | |
| 260 | W | A | -2.0676 | |
| 261 | E | A | -1.9706 | |
| 262 | I | A | -0.9011 | |
| 263 | P | A | 0.0000 | |
| 264 | G | A | -1.7752 | |
| 265 | G | A | -0.8638 | |
| 266 | V | A | 0.4694 | |
| 267 | S | A | 0.0000 | |
| 268 | S | A | 0.1409 | |
| 269 | V | A | 0.5518 | |
| 270 | A | A | -0.9251 | |
| 271 | C | A | 0.0000 | |
| 272 | R | A | -1.6065 | |
| 273 | S | A | -0.8137 | |
| 274 | P | A | 0.0000 | |
| 275 | R | A | -0.3094 | |
| 276 | V | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | E | A | -0.9244 | |
| 279 | W | A | 0.0000 | |
| 280 | E | A | -2.8022 | |
| 281 | E | A | -3.1630 | |
| 282 | G | A | -2.3660 | |
| 283 | T | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | L | A | 0.0000 | |
| 286 | M | A | 0.0000 | |
| 287 | V | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | Y | A | -1.6127 | |
| 290 | C | A | 0.0000 | |
| 291 | E | A | -3.2406 | |
| 292 | D | A | -3.1939 | |
| 293 | G | A | 0.0000 | |
| 294 | R | A | 0.0000 | |
| 295 | K | A | -0.8790 | |
| 296 | V | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | E | A | -0.9978 | |
| 299 | S | A | 0.0000 | |
| 300 | R | A | -2.8716 | |
| 301 | D | A | -1.9846 | |
| 302 | M | A | -1.1257 | |
| 303 | G | A | 0.0000 | |
| 304 | K | A | -2.1128 | |
| 305 | T | A | -1.3368 | |
| 306 | W | A | -1.0115 | |
| 307 | T | A | -0.7134 | |
| 308 | E | A | -0.9994 | |
| 309 | A | A | -0.0051 | |
| 310 | F | A | 1.2812 | |
| 311 | G | A | 0.0270 | |
| 312 | T | A | -0.2555 | |
| 313 | L | A | 0.0000 | |
| 314 | P | A | -0.3098 | |
| 315 | G | A | 0.1761 | |
| 316 | V | A | 0.0000 | |
| 317 | W | A | 0.0835 | |
| 318 | L | A | -0.6542 | |
| 319 | K | A | -2.3296 | |
| 320 | S | A | -2.5070 | |
| 321 | G | A | -2.0112 | |
| 322 | P | A | -1.4347 | |
| 323 | E | A | -2.2278 | |
| 324 | L | A | -1.9845 | |
| 325 | P | A | -2.0588 | |
| 326 | E | A | -3.2847 | |
| 327 | K | A | -2.6122 | |
| 328 | S | A | -1.5140 | |
| 329 | L | A | 0.0000 | |
| 330 | R | A | -0.8919 | |
| 331 | V | A | 0.0000 | |
| 332 | D | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | I | A | 0.2614 | |
| 336 | T | A | -0.1017 | |
| 337 | A | A | 0.0000 | |
| 338 | T | A | -1.7932 | |
| 339 | I | A | -2.0385 | |
| 340 | E | A | -2.8069 | |
| 341 | G | A | -2.4354 | |
| 342 | R | A | -3.0977 | |
| 343 | K | A | -2.5092 | |
| 344 | V | A | 0.0000 | |
| 345 | M | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | Y | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | Q | A | 0.0000 | |
| 350 | K | A | 0.0000 | |
| 351 | V | A | 0.0977 | |
| 352 | R | A | -0.9783 | |
| 353 | H | A | -1.4721 | |
| 354 | F | A | -0.0070 | |
| 355 | K | A | -1.9776 | |
| 356 | E | A | -2.3062 | |
| 357 | V | A | -0.3555 | |
| 358 | D | A | -2.3163 | |
| 359 | E | A | -2.4643 | |
| 360 | P | A | -1.3142 | |
| 361 | N | A | -0.6773 | |
| 362 | A | A | 0.0000 | |
| 363 | L | A | 0.0000 | |
| 364 | H | A | 0.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | W | A | 0.1338 | |
| 367 | V | A | 0.0000 | |
| 368 | T | A | 0.0000 | |
| 369 | D | A | -2.0642 | |
| 370 | N | A | -2.1250 | |
| 371 | N | A | -2.6447 | |
| 372 | R | A | -2.4714 | |
| 373 | T | A | 0.0000 | |
| 374 | F | A | 0.2122 | |
| 375 | H | A | -0.2571 | |
| 376 | L | A | -0.6224 | |
| 377 | G | A | -0.1936 | |
| 378 | P | A | 0.2660 | |
| 379 | F | A | 0.0000 | |
| 380 | S | A | 0.0000 | |
| 381 | V | A | 0.5867 | |
| 382 | D | A | 0.0000 | |
| 383 | S | A | -1.2367 | |
| 384 | A | A | -1.4222 | |
| 385 | E | A | -3.0007 | |
| 386 | N | A | -2.3613 | |
| 387 | K | A | -1.7815 | |
| 388 | T | A | 0.0000 | |
| 389 | F | A | -0.4761 | |
| 390 | A | A | -0.1527 | |
| 391 | N | A | 0.0000 | |
| 392 | T | A | 0.0000 | |
| 393 | L | A | 0.0000 | |
| 394 | L | A | 0.0606 | |
| 395 | Y | A | -0.4594 | |
| 396 | S | A | -1.3860 | |
| 397 | D | A | -2.9360 | |
| 398 | D | A | -2.7766 | |
| 399 | A | A | -1.7426 | |
| 400 | L | A | 0.0000 | |
| 401 | H | A | 0.0000 | |
| 402 | L | A | 0.0000 | |
| 403 | L | A | 0.0000 | |
| 404 | Q | A | 0.0000 | |
| 405 | A | A | 0.0000 | |
| 406 | K | A | -1.1877 | |
| 407 | G | A | 0.0000 | |
| 408 | D | A | -2.7906 | |
| 409 | H | A | -2.6694 | |
| 410 | E | A | -3.1512 | |
| 411 | S | A | -2.0408 | |
| 412 | T | A | 0.0000 | |
| 413 | A | A | -0.2167 | |
| 414 | V | A | 0.0000 | |
| 415 | S | A | -0.3095 | |
| 416 | L | A | 0.0000 | |
| 417 | A | A | 0.0000 | |
| 418 | R | A | -0.9432 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5351 | |
| 421 | E | A | -2.4236 | |
| 422 | E | A | -1.4015 | |
| 423 | L | A | -1.1849 | |
| 424 | N | A | -1.7695 | |
| 425 | T | A | -0.9111 | |
| 426 | I | A | -0.3478 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine