Project name: 388a5efb6ae870b

Status: done

Started: 2026-06-27 14:48:05
Settings
Chain sequence(s) A: AEAEAKAKAEAEAKAK
C: AEAEAKAKAEAEAKAK
B: AEAEAKAKAEAEAKAK
D: AEAEAKAKAEAEAKAK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:37)
Show buried residues

Minimal score value
-3.5843
Maximal score value
0.0
Average score
-2.0739
Total score value
-132.7307

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -1.1616
2 E A -2.2183
3 A A -1.8836
4 E A -1.7444
5 A A -1.9429
6 K A -2.7746
7 A A -2.2646
8 K A -2.3628
9 A A -2.1179
10 E A -2.6130
11 A A -2.7877
12 E A -3.0673
13 A A -2.0754
14 K A -2.7302
15 A A 0.0000
16 K A -3.5257
1 A B -1.1786
2 E B -2.2504
3 A B -1.9530
4 E B -2.0010
5 A B -2.0415
6 K B -2.7705
7 A B -2.2702
8 K B -2.3936
9 A B -2.1637
10 E B -2.6022
11 A B -2.7170
12 E B -2.9652
13 A B -2.1370
14 K B -2.9900
15 A B 0.0000
16 K B -3.5843
1 A C -1.1817
2 E C -2.2409
3 A C -1.9004
4 E C -1.7971
5 A C -1.9292
6 K C -2.6091
7 A C -2.0186
8 K C -1.9516
9 A C -1.7473
10 E C -1.9358
11 A C -2.1895
12 E C 0.0000
13 A C -1.5582
14 K C -2.1517
15 A C 0.0000
16 K C -3.4112
1 A D -1.1593
2 E D -2.2308
3 A D -1.8992
4 E D -1.9001
5 A D -1.9646
6 K D -2.6603
7 A D -2.1250
8 K D -2.1171
9 A D -1.8421
10 E D -2.2437
11 A D -2.3073
12 E D -2.6041
13 A D -1.8034
14 K D -2.5095
15 A D 0.0000
16 K D -3.4537
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Laboratory of Theory of Biopolymers 2018