| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARGKSCGVIAMPLAGQATHRVHMEVMPEEEENSAFESVPNSVQSPELDPESTQPSLPGTTSGSLGSVPGAPAPPAASYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0671 | |
| 2 | D | A | -1.9664 | |
| 3 | A | A | -1.0838 | |
| 4 | M | A | -0.3842 | |
| 5 | K | A | -1.9261 | |
| 6 | R | A | -1.6496 | |
| 7 | G | A | 0.2074 | |
| 8 | L | A | 1.9881 | |
| 9 | C | A | 2.1250 | |
| 10 | C | A | 2.8636 | |
| 11 | V | A | 4.2067 | |
| 12 | L | A | 4.3716 | |
| 13 | L | A | 4.6358 | |
| 14 | L | A | 4.8497 | |
| 15 | C | A | 4.0381 | |
| 16 | G | A | 3.5426 | |
| 17 | A | A | 3.5563 | |
| 18 | V | A | 4.0466 | |
| 19 | F | A | 4.2939 | |
| 20 | V | A | 3.2509 | |
| 21 | S | A | 1.4290 | |
| 22 | P | A | 0.1277 | |
| 23 | S | A | -1.0215 | |
| 24 | Q | A | -1.7857 | |
| 25 | E | A | -1.8411 | |
| 26 | I | A | -0.0975 | |
| 27 | H | A | -1.2948 | |
| 28 | A | A | -1.2760 | |
| 29 | R | A | -2.4204 | |
| 30 | G | A | -2.3067 | |
| 31 | K | A | -2.1697 | |
| 32 | S | A | -0.8369 | |
| 33 | C | A | 0.0665 | |
| 34 | G | A | 0.6871 | |
| 35 | V | A | 1.5619 | |
| 36 | I | A | 2.6897 | |
| 37 | A | A | 1.5732 | |
| 38 | M | A | 1.9173 | |
| 39 | P | A | 0.9253 | |
| 40 | L | A | 0.8349 | |
| 41 | A | A | 0.1706 | |
| 42 | G | A | -0.7054 | |
| 43 | Q | A | -1.3229 | |
| 44 | A | A | -0.8774 | |
| 45 | T | A | -0.8045 | |
| 46 | H | A | -1.1091 | |
| 47 | R | A | -0.8884 | |
| 48 | V | A | 0.7651 | |
| 49 | H | A | -0.1228 | |
| 50 | M | A | 0.4891 | |
| 51 | E | A | -0.6153 | |
| 52 | V | A | 0.8865 | |
| 53 | M | A | 0.3740 | |
| 54 | P | A | -1.3740 | |
| 55 | E | A | -3.0830 | |
| 56 | E | A | -4.2297 | |
| 57 | E | A | -4.5565 | |
| 58 | E | A | -4.1673 | |
| 59 | N | A | -2.8678 | |
| 60 | S | A | -1.3341 | |
| 61 | A | A | -0.0010 | |
| 62 | F | A | 0.8398 | |
| 63 | E | A | -0.5940 | |
| 64 | S | A | 0.0753 | |
| 65 | V | A | 0.8006 | |
| 66 | P | A | -0.0231 | |
| 67 | N | A | -0.7552 | |
| 68 | S | A | -0.1102 | |
| 69 | V | A | 0.6797 | |
| 70 | Q | A | -0.8816 | |
| 71 | S | A | -0.8210 | |
| 72 | P | A | -1.1608 | |
| 73 | E | A | -1.8944 | |
| 74 | L | A | -0.6818 | |
| 75 | D | A | -2.2344 | |
| 76 | P | A | -1.8535 | |
| 77 | E | A | -2.5085 | |
| 78 | S | A | -1.6996 | |
| 79 | T | A | -1.5120 | |
| 80 | Q | A | -1.5001 | |
| 81 | P | A | -0.5860 | |
| 82 | S | A | -0.0719 | |
| 83 | L | A | 0.9383 | |
| 84 | P | A | 0.1499 | |
| 85 | G | A | -0.2689 | |
| 86 | T | A | -0.2063 | |
| 87 | T | A | -0.3918 | |
| 88 | S | A | -0.4115 | |
| 89 | G | A | -0.3480 | |
| 90 | S | A | 0.0654 | |
| 91 | L | A | 1.2475 | |
| 92 | G | A | 0.5211 | |
| 93 | S | A | 0.7189 | |
| 94 | V | A | 1.5226 | |
| 95 | P | A | 0.2503 | |
| 96 | G | A | -0.1671 | |
| 97 | A | A | 0.0151 | |
| 98 | P | A | -0.4446 | |
| 99 | A | A | -0.2884 | |
| 100 | P | A | -0.3810 | |
| 101 | P | A | -0.3845 | |
| 102 | A | A | 0.0145 | |
| 103 | A | A | 0.2198 | |
| 104 | S | A | 0.5492 | |
| 105 | Y | A | 1.2691 | |
| 106 | P | A | 0.6682 | |
| 107 | Y | A | 1.1584 | |
| 108 | D | A | -0.4952 | |
| 109 | V | A | 0.8131 | |
| 110 | P | A | -0.2086 | |
| 111 | D | A | -1.0090 | |
| 112 | Y | A | 0.6352 | |
| 113 | A | A | 0.1642 |