Project name: query_structure

Status: done

Started: 2026-03-16 23:09:46
Settings
Chain sequence(s) A: ESCVWIPCISKVIGCACKSKVCYKNGTFPCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-1.6757
Maximal score value
2.6745
Average score
0.1015
Total score value
3.1478

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -0.7811
2 S A -0.3872
3 C A 0.4715
4 V A 0.9529
5 W A 2.2103
6 I A 2.6745
7 P A 1.3225
8 C A 0.0000
9 I A 2.2181
10 S A 0.0000
11 K A 0.4009
12 V A 2.3372
13 I A 2.3115
14 G A 0.3846
15 C A 0.0000
16 A A -0.4340
17 C A -0.8148
18 K A -1.6659
19 S A -1.4129
20 K A -1.5263
21 V A -0.8761
22 C A 0.0000
23 Y A -0.9009
24 K A -1.3965
25 N A -1.6757
26 G A -1.1309
27 T A -0.0182
28 F A 1.0266
29 P A 0.1908
30 C A -0.0376
31 G A -0.2955
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Laboratory of Theory of Biopolymers 2018