| Chain sequence(s) |
H: EVQLQESGGGLMQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGNGNYRAMDYWGQGTSVTVS
L: DIQMTQSPASLSVSVGETVSITCRASENIYSSLAWYQQKQGKSPQLLVYSATILADGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWGTPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9541 | |
| 2 | V | H | -0.9348 | |
| 3 | Q | H | -1.0607 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -0.8184 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7773 | |
| 8 | G | H | -0.9806 | |
| 9 | G | H | -0.4110 | |
| 11 | G | H | 0.3301 | |
| 12 | L | H | 1.1293 | |
| 13 | M | H | -0.0648 | |
| 14 | Q | H | -1.2974 | |
| 15 | P | H | -1.5275 | |
| 16 | G | H | -1.2913 | |
| 17 | G | H | -1.0321 | |
| 18 | S | H | -0.9443 | |
| 19 | M | H | -0.7270 | |
| 20 | K | H | -1.6143 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3855 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.1031 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9308 | |
| 27 | G | H | -1.1981 | |
| 28 | F | H | 0.0000 | |
| 29 | T | H | -0.6509 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.2976 | |
| 36 | N | H | -1.5141 | |
| 37 | Y | H | -0.5435 | |
| 38 | W | H | -0.3864 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5227 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -1.4214 | |
| 47 | E | H | -2.6085 | |
| 48 | K | H | -2.1905 | |
| 49 | G | H | -1.2572 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.5643 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -0.8827 | |
| 58 | L | H | -1.3964 | |
| 59 | K | H | -2.5226 | |
| 60 | S | H | -1.7806 | |
| 61 | N | H | -1.7442 | |
| 62 | N | H | -2.0528 | |
| 63 | Y | H | -1.1012 | |
| 64 | A | H | -0.7733 | |
| 65 | T | H | -0.2779 | |
| 66 | H | H | -0.6633 | |
| 67 | Y | H | -1.0514 | |
| 68 | A | H | -1.4266 | |
| 69 | E | H | -2.5163 | |
| 70 | S | H | -1.7259 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6228 | |
| 74 | G | H | -1.6891 | |
| 75 | R | H | -1.3764 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7993 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1315 | |
| 80 | R | H | 0.0000 | |
| 81 | D | H | -1.4286 | |
| 82 | D | H | -1.9339 | |
| 83 | S | H | -1.5876 | |
| 84 | K | H | -2.2275 | |
| 85 | R | H | -1.7181 | |
| 86 | S | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.1966 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0012 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1411 | |
| 93 | T | H | -1.0500 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0204 | |
| 96 | A | H | -1.6018 | |
| 97 | E | H | -2.5030 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6023 | |
| 100 | G | H | -0.5152 | |
| 101 | I | H | 0.3096 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | N | H | -0.4218 | |
| 109 | G | H | -1.1087 | |
| 110 | N | H | -1.1204 | |
| 112 | Y | H | -0.0110 | |
| 113 | R | H | 0.0000 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.2354 | |
| 118 | W | H | -0.3153 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8297 | |
| 121 | G | H | -0.9252 | |
| 122 | T | H | -0.5104 | |
| 123 | S | H | -0.0792 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0180 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5454 | |
| 1 | D | L | -2.2270 | |
| 2 | I | L | -1.8376 | |
| 3 | Q | L | -2.2146 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4053 | |
| 6 | Q | L | -0.9958 | |
| 7 | S | L | -0.7940 | |
| 8 | P | L | -0.5071 | |
| 9 | A | L | -0.6074 | |
| 10 | S | L | -1.0732 | |
| 11 | L | L | -0.5320 | |
| 12 | S | L | -0.6059 | |
| 13 | V | L | -0.1717 | |
| 14 | S | L | -0.1552 | |
| 15 | V | L | 0.6359 | |
| 16 | G | L | -0.6337 | |
| 17 | E | L | -1.4062 | |
| 18 | T | L | -1.0526 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6515 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -1.0201 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.9465 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1313 | |
| 27 | E | L | -2.3083 | |
| 28 | N | L | -1.3774 | |
| 29 | I | L | 0.0000 | |
| 36 | Y | L | 0.8385 | |
| 37 | S | L | 0.3324 | |
| 38 | S | L | 0.5825 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.7656 | |
| 45 | K | L | -2.6075 | |
| 46 | Q | L | -2.3739 | |
| 47 | G | L | -2.2125 | |
| 48 | K | L | -2.9878 | |
| 49 | S | L | -1.7732 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -1.1822 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | V | L | 0.0000 | |
| 55 | Y | L | 0.8431 | |
| 56 | S | L | 0.5772 | |
| 57 | A | L | 0.0000 | |
| 65 | T | L | 0.5411 | |
| 66 | I | L | 1.3196 | |
| 67 | L | L | 0.6226 | |
| 68 | A | L | -0.4654 | |
| 69 | D | L | -1.7289 | |
| 70 | G | L | -1.2012 | |
| 71 | V | L | -0.5362 | |
| 72 | P | L | -0.4811 | |
| 74 | S | L | -0.4111 | |
| 75 | R | L | -0.8354 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3446 | |
| 78 | G | L | -0.1344 | |
| 79 | S | L | -0.5650 | |
| 80 | G | L | -0.8875 | |
| 83 | S | L | -0.7493 | |
| 84 | G | L | -0.9161 | |
| 85 | T | L | -1.7777 | |
| 86 | Q | L | -2.2698 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -1.0400 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.2352 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -1.3041 | |
| 93 | S | L | -1.0121 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7821 | |
| 96 | S | L | -0.6156 | |
| 97 | E | L | -1.6090 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.0000 | |
| 100 | G | L | -1.7112 | |
| 101 | T | L | -1.4582 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | F | L | 0.8406 | |
| 108 | W | L | 0.9836 | |
| 109 | G | L | 0.0161 | |
| 114 | T | L | -0.2485 | |
| 115 | P | L | -0.8291 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.5640 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0314 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2405 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.1879 | |
| 126 | I | L | 0.8155 | |
| 127 | K | L | -0.8393 |