| Chain sequence(s) |
H: EVQLVQSGGGVERPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWVSGINWQGGSTGYADSVKGRVTISRDNAKNSLYLQMNSLRAEDTAVYYCAKILGAGRGWYFDYWGKGTTVTVSS
L: SELTQDPAVSVALGQTVRITCSGDSLRSYYASWYQQKPGQAPVLVIYGANNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSADSSGNHVVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9617 | |
| 2 | V | H | -0.6872 | |
| 3 | Q | H | -0.5257 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1541 | |
| 6 | Q | H | 0.0967 | |
| 7 | S | H | -0.4229 | |
| 8 | G | H | -0.7566 | |
| 9 | G | H | -0.3549 | |
| 11 | G | H | 0.3482 | |
| 12 | V | H | 0.9722 | |
| 13 | E | H | -0.8823 | |
| 14 | R | H | -2.2693 | |
| 15 | P | H | -2.3085 | |
| 16 | G | H | -1.7348 | |
| 17 | G | H | -1.4275 | |
| 18 | S | H | -1.3295 | |
| 19 | L | H | -0.9033 | |
| 20 | R | H | -1.4022 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2353 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0975 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6220 | |
| 27 | G | H | -1.0762 | |
| 28 | F | H | -0.6667 | |
| 29 | T | H | -0.7213 | |
| 30 | F | H | 0.0000 | |
| 35 | D | H | -1.5580 | |
| 36 | D | H | -1.3086 | |
| 37 | Y | H | -0.2968 | |
| 38 | A | H | -0.1145 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7744 | |
| 45 | A | H | -1.1807 | |
| 46 | P | H | -0.9677 | |
| 47 | G | H | -1.5312 | |
| 48 | K | H | -2.2460 | |
| 49 | G | H | -1.5098 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8747 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.4838 | |
| 58 | W | H | -0.3566 | |
| 59 | Q | H | -1.4603 | |
| 62 | G | H | -0.9628 | |
| 63 | G | H | -0.8321 | |
| 64 | S | H | -0.6899 | |
| 65 | T | H | -0.4650 | |
| 66 | G | H | -0.6857 | |
| 67 | Y | H | -0.8817 | |
| 68 | A | H | -1.2459 | |
| 69 | D | H | -2.2756 | |
| 70 | S | H | -1.6011 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -1.8792 | |
| 74 | G | H | -1.4077 | |
| 75 | R | H | -1.4357 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.7037 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5972 | |
| 80 | R | H | -1.0516 | |
| 81 | D | H | -1.6014 | |
| 82 | N | H | -1.8957 | |
| 83 | A | H | -1.4016 | |
| 84 | K | H | -2.3305 | |
| 85 | N | H | -2.0602 | |
| 86 | S | H | -1.1644 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3651 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0604 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.5776 | |
| 93 | S | H | -1.4467 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.5411 | |
| 96 | A | H | -1.9045 | |
| 97 | E | H | -2.2570 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6622 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0997 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | I | H | 0.0000 | |
| 108 | L | H | 0.4435 | |
| 109 | G | H | -0.4720 | |
| 110 | A | H | -0.5066 | |
| 111 | G | H | -1.2924 | |
| 112A | R | H | -2.0974 | |
| 112 | G | H | -0.7811 | |
| 113 | W | H | -0.4163 | |
| 114 | Y | H | 0.1902 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.5927 | |
| 117 | Y | H | 0.8924 | |
| 118 | W | H | 0.3996 | |
| 119 | G | H | 0.0000 | |
| 120 | K | H | -1.4836 | |
| 121 | G | H | -0.7454 | |
| 122 | T | H | -0.3277 | |
| 123 | T | H | 0.1108 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2122 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.0140 | |
| 128 | S | H | -0.8443 | |
| 2 | S | L | -1.5989 | |
| 3 | E | L | -2.3298 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -1.0980 | |
| 6 | Q | L | -0.8340 | |
| 7 | D | L | -0.8391 | |
| 8 | P | L | -0.8306 | |
| 9 | A | L | -0.4925 | |
| 11 | V | L | -0.2488 | |
| 12 | S | L | 0.2640 | |
| 13 | V | L | 0.0000 | |
| 14 | A | L | 0.7669 | |
| 15 | L | L | 1.0101 | |
| 16 | G | L | -0.3975 | |
| 17 | Q | L | -0.9892 | |
| 18 | T | L | -0.9345 | |
| 19 | V | L | 0.0000 | |
| 20 | R | L | -1.1013 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.4643 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.3038 | |
| 25 | G | L | -2.0936 | |
| 26 | D | L | -3.0677 | |
| 27 | S | L | 0.0000 | |
| 28 | L | L | 0.0000 | |
| 29 | R | L | -2.6736 | |
| 36 | S | L | -1.2211 | |
| 37 | Y | L | -0.3316 | |
| 38 | Y | L | 0.6203 | |
| 39 | A | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3208 | |
| 46 | P | L | -1.1894 | |
| 47 | G | L | -1.2392 | |
| 48 | Q | L | -1.7085 | |
| 49 | A | L | -0.8610 | |
| 50 | P | L | 0.0000 | |
| 51 | V | L | 0.7656 | |
| 52 | L | L | 0.0000 | |
| 53 | V | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3740 | |
| 56 | G | L | -0.2219 | |
| 57 | A | L | 0.0000 | |
| 65 | N | L | -1.7278 | |
| 66 | N | L | -1.7050 | |
| 67 | R | L | -1.8248 | |
| 68 | P | L | -0.6684 | |
| 69 | S | L | -0.8408 | |
| 70 | G | L | -0.8068 | |
| 71 | I | L | -0.7003 | |
| 72 | P | L | -1.1851 | |
| 74 | D | L | -2.1063 | |
| 75 | R | L | -1.2058 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.3504 | |
| 78 | G | L | -1.1208 | |
| 79 | S | L | -0.7301 | |
| 80 | S | L | -0.6718 | |
| 83 | S | L | -0.8531 | |
| 84 | G | L | -1.7599 | |
| 85 | N | L | -2.1064 | |
| 86 | T | L | -1.0829 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.6235 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7554 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -1.0981 | |
| 93 | G | L | -0.7784 | |
| 94 | A | L | 0.0000 | |
| 95 | Q | L | -1.0048 | |
| 96 | A | L | -0.6048 | |
| 97 | E | L | -1.7933 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.3345 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.1383 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | N | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | D | L | -1.2253 | |
| 109 | S | L | -1.4193 | |
| 110 | S | L | -0.7507 | |
| 113 | G | L | 0.0000 | |
| 114 | N | L | -1.4855 | |
| 115 | H | L | -0.9394 | |
| 116 | V | L | 0.0000 | |
| 117 | V | L | -0.5963 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.3800 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1690 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | 0.2486 | |
| 126 | V | L | 0.6279 | |
| 127 | L | L | 1.7196 |