| Chain sequence(s) |
H: QVQLVQSGAEGRKPGSSVKVSCKVSGDTFSSYAISWVRQAPGQGLEWMGGIIPIFGAADYAQKFKGRVTISADESTSTAYMELSSLRSEDTAVYYCAKGPDYYGSFDPWGQGTLITVSS
L: DIQMTQSPSSLSASVGDRVTITCRTSQTITNYLNWYQQKPGRAPKLLIFDASNLETGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQSYNPGYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.8725 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.6419 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7431 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3875 | |
| 8 | G | H | -0.4136 | |
| 9 | A | H | -0.2198 | |
| 11 | E | H | -1.1731 | |
| 12 | G | H | -1.3636 | |
| 13 | R | H | -2.2418 | |
| 14 | K | H | -2.7670 | |
| 15 | P | H | -2.1619 | |
| 16 | G | H | -1.6939 | |
| 17 | S | H | -1.3499 | |
| 18 | S | H | -1.5149 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.1935 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5397 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6244 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.2046 | |
| 27 | G | H | -1.7044 | |
| 28 | D | H | -1.8897 | |
| 29 | T | H | -0.7797 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | 0.5186 | |
| 36 | S | H | 0.2866 | |
| 37 | Y | H | 0.0471 | |
| 38 | A | H | 0.3644 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5400 | |
| 45 | A | H | -0.9124 | |
| 46 | P | H | -0.7331 | |
| 47 | G | H | -1.2149 | |
| 48 | Q | H | -1.8394 | |
| 49 | G | H | -1.3341 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7867 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | 1.3276 | |
| 58 | P | H | 0.0000 | |
| 59 | I | H | 2.6065 | |
| 62 | F | H | 2.8523 | |
| 63 | G | H | 0.9804 | |
| 64 | A | H | 0.8328 | |
| 65 | A | H | -0.0225 | |
| 66 | D | H | -1.0616 | |
| 67 | Y | H | -1.4879 | |
| 68 | A | H | -2.0202 | |
| 69 | Q | H | -2.9850 | |
| 70 | K | H | -2.8313 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0148 | |
| 74 | G | H | -1.9017 | |
| 75 | R | H | -1.7915 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -1.1115 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4464 | |
| 80 | A | H | -0.5459 | |
| 81 | D | H | -1.3594 | |
| 82 | E | H | -1.9006 | |
| 83 | S | H | -1.2668 | |
| 84 | T | H | -1.0666 | |
| 85 | S | H | -1.4791 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.6462 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.7562 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2698 | |
| 93 | S | H | -1.2677 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.1807 | |
| 96 | S | H | -2.4082 | |
| 97 | E | H | -2.5565 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.9776 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5015 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | P | H | -0.4647 | |
| 109 | D | H | -0.9389 | |
| 110 | Y | H | 0.9256 | |
| 112 | Y | H | 0.9927 | |
| 113 | G | H | 0.0000 | |
| 114 | S | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.5771 | |
| 117 | P | H | -0.8651 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3987 | |
| 121 | G | H | -0.5320 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.6569 | |
| 124 | I | H | 0.0000 | |
| 125 | T | H | -1.0418 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.5827 | |
| 128 | S | H | -1.1329 | |
| 1 | D | L | -2.4528 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2409 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4242 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7754 | |
| 8 | P | L | -0.5782 | |
| 9 | S | L | -0.9127 | |
| 10 | S | L | -1.1626 | |
| 11 | L | L | -0.7494 | |
| 12 | S | L | -0.8731 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1607 | |
| 15 | V | L | 0.7469 | |
| 16 | G | L | -0.5127 | |
| 17 | D | L | -1.4254 | |
| 18 | R | L | -2.0870 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5849 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8130 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.6433 | |
| 25 | T | L | 0.0000 | |
| 26 | S | L | -1.8080 | |
| 27 | Q | L | -1.7037 | |
| 28 | T | L | -0.8198 | |
| 29 | I | L | 0.0000 | |
| 36 | T | L | -0.4247 | |
| 37 | N | L | -0.4861 | |
| 38 | Y | L | 0.5519 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7932 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7045 | |
| 46 | P | L | -1.2498 | |
| 47 | G | L | -1.7143 | |
| 48 | R | L | -2.6962 | |
| 49 | A | L | -1.6702 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1554 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | F | L | 0.2508 | |
| 56 | D | L | -0.1774 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5739 | |
| 66 | N | L | -0.5556 | |
| 67 | L | L | -0.0370 | |
| 68 | E | L | -0.3672 | |
| 69 | T | L | -0.3528 | |
| 70 | G | L | -0.4615 | |
| 71 | V | L | -0.2578 | |
| 72 | P | L | -0.3204 | |
| 74 | S | L | -0.3952 | |
| 75 | R | L | -0.7441 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3918 | |
| 78 | G | L | -0.3858 | |
| 79 | S | L | -0.8081 | |
| 80 | G | L | -1.1349 | |
| 83 | S | L | -1.0842 | |
| 84 | G | L | -1.0194 | |
| 85 | T | L | -1.5332 | |
| 86 | D | L | -1.9347 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7189 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5871 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2266 | |
| 93 | S | L | -0.9805 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.4957 | |
| 96 | P | L | -0.7008 | |
| 97 | E | L | -1.7589 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6711 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1328 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | Y | L | 1.1076 | |
| 109 | N | L | -0.1754 | |
| 114 | P | L | -0.5808 | |
| 115 | G | L | -0.9509 | |
| 116 | Y | L | -0.3496 | |
| 117 | T | L | -0.7567 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6214 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.9882 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.3097 | |
| 126 | I | L | 0.6664 | |
| 127 | K | L | -0.9236 |