| Chain sequence(s) |
A: GGSGGTPLGLWAAEEAHSSKLQGSGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7394 | |
| 2 | G | A | -0.8959 | |
| 3 | S | A | -0.8624 | |
| 4 | G | A | -0.9104 | |
| 5 | G | A | -0.6463 | |
| 6 | T | A | -0.1555 | |
| 7 | P | A | 0.2773 | |
| 8 | L | A | 1.4391 | |
| 9 | G | A | 1.2482 | |
| 10 | L | A | 2.2305 | |
| 11 | W | A | 1.8942 | |
| 12 | A | A | 0.6159 | |
| 13 | A | A | -0.9378 | |
| 14 | E | A | -2.6632 | |
| 15 | E | A | -2.8773 | |
| 16 | A | A | -1.7400 | |
| 17 | H | A | -1.4813 | |
| 18 | S | A | -1.1401 | |
| 19 | S | A | -1.0403 | |
| 20 | K | A | -1.3313 | |
| 21 | L | A | -0.0177 | |
| 22 | Q | A | -1.0565 | |
| 23 | G | A | -0.9399 | |
| 24 | S | A | -1.0119 | |
| 25 | G | A | -0.8959 | |
| 26 | G | A | -0.7394 |