| Chain sequence(s) |
A: GCLGDKCDYNNGCCSGYVCSRTWKWCVLAGPW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1944 | |
| 2 | C | A | 0.1900 | |
| 3 | L | A | 1.0440 | |
| 4 | G | A | -0.9730 | |
| 5 | D | A | -2.5725 | |
| 6 | K | A | -3.0415 | |
| 7 | C | A | 0.0000 | |
| 8 | D | A | -2.6685 | |
| 9 | Y | A | -0.6723 | |
| 10 | N | A | -1.7944 | |
| 11 | N | A | -2.5049 | |
| 12 | G | A | -1.5282 | |
| 13 | C | A | -0.2703 | |
| 14 | C | A | 0.5601 | |
| 15 | S | A | 0.2206 | |
| 16 | G | A | 0.3796 | |
| 17 | Y | A | 1.4124 | |
| 18 | V | A | 1.3548 | |
| 19 | C | A | -0.5704 | |
| 20 | S | A | -0.7617 | |
| 21 | R | A | -1.9928 | |
| 22 | T | A | -0.6222 | |
| 23 | W | A | -0.0397 | |
| 24 | K | A | -1.8878 | |
| 25 | W | A | -1.6258 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | 1.4554 | |
| 28 | L | A | 2.1419 | |
| 29 | A | A | 0.9384 | |
| 30 | G | A | 0.3264 | |
| 31 | P | A | 0.2733 | |
| 32 | W | A | 0.9300 |