| Chain sequence(s) |
A: NFMLTQPHSVSESPGKTLTISCTGSSASIASHYVQWYQQRPGGAPTTLIYENDQRPSEVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDGNNHWVFGGGTKLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.1964 | |
| 2 | F | A | -0.1183 | |
| 3 | M | A | 0.9529 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | 0.0687 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -0.8925 | |
| 8 | H | A | -1.5962 | |
| 9 | S | A | -1.2294 | |
| 10 | V | A | -0.5978 | |
| 11 | S | A | -0.2116 | |
| 12 | E | A | -0.4423 | |
| 13 | S | A | -0.3918 | |
| 14 | P | A | -0.9708 | |
| 15 | G | A | -1.6210 | |
| 16 | K | A | -1.9285 | |
| 17 | T | A | -1.0976 | |
| 18 | L | A | -0.3837 | |
| 19 | T | A | -0.0898 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.1157 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.2508 | |
| 24 | G | A | 0.0000 | |
| 25 | S | A | -0.1110 | |
| 26 | S | A | -0.2699 | |
| 27 | A | A | -0.3226 | |
| 28 | S | A | -0.5866 | |
| 29 | I | A | 0.0000 | |
| 30 | A | A | -0.2445 | |
| 31 | S | A | -0.3932 | |
| 32 | H | A | -0.5393 | |
| 33 | Y | A | 0.0428 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -0.3727 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.0065 | |
| 38 | Q | A | 0.0000 | |
| 39 | Q | A | -1.8680 | |
| 40 | R | A | -2.8831 | |
| 41 | P | A | -1.6823 | |
| 42 | G | A | -1.1664 | |
| 43 | G | A | -1.1635 | |
| 44 | A | A | -0.6651 | |
| 45 | P | A | -0.7784 | |
| 46 | T | A | -0.3902 | |
| 47 | T | A | -0.0200 | |
| 48 | L | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | Y | A | -0.8324 | |
| 51 | E | A | -1.6250 | |
| 52 | N | A | -1.5793 | |
| 53 | D | A | -2.6260 | |
| 54 | Q | A | -2.3544 | |
| 55 | R | A | -2.2363 | |
| 56 | P | A | -1.1799 | |
| 57 | S | A | -1.5207 | |
| 58 | E | A | -2.2025 | |
| 59 | V | A | -1.4634 | |
| 60 | P | A | -1.6174 | |
| 61 | D | A | -2.3680 | |
| 62 | R | A | -1.2768 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -1.3874 | |
| 65 | G | A | -1.3470 | |
| 66 | S | A | -1.1686 | |
| 67 | I | A | -0.6283 | |
| 68 | D | A | -1.3382 | |
| 69 | S | A | -0.9889 | |
| 70 | S | A | -0.8290 | |
| 71 | S | A | -0.8141 | |
| 72 | N | A | -0.8588 | |
| 73 | S | A | -0.6919 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | -0.5647 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | -0.2035 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | -1.1802 | |
| 80 | G | A | -1.4500 | |
| 81 | L | A | 0.0000 | |
| 82 | K | A | -2.2370 | |
| 83 | T | A | -1.6389 | |
| 84 | E | A | -2.6777 | |
| 85 | D | A | 0.0000 | |
| 86 | E | A | -2.5811 | |
| 87 | A | A | 0.0000 | |
| 88 | D | A | -2.2082 | |
| 89 | Y | A | 0.0000 | |
| 90 | Y | A | -0.0041 | |
| 91 | C | A | 0.0000 | |
| 92 | Q | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | Y | A | -0.4379 | |
| 95 | D | A | -1.8034 | |
| 96 | G | A | -1.7200 | |
| 97 | N | A | -2.2215 | |
| 98 | N | A | -2.1049 | |
| 99 | H | A | -1.5276 | |
| 100 | W | A | 0.5274 | |
| 101 | V | A | 1.1037 | |
| 102 | F | A | 1.7860 | |
| 103 | G | A | 0.6451 | |
| 104 | G | A | -0.3478 | |
| 105 | G | A | -0.8018 | |
| 106 | T | A | 0.0000 | |
| 107 | K | A | -2.3570 | |
| 108 | L | A | 0.0000 | |
| 109 | T | A | -0.6221 | |
| 110 | V | A | -0.2922 | |
| 111 | L | A | 1.1360 |