| Chain sequence(s) |
A: GLLCYCRKGHCKRGERVRGTCGIRFLYCCPRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.1785 | |
| 2 | L | A | 1.8557 | |
| 3 | L | A | 1.4854 | |
| 4 | C | A | 1.0670 | |
| 5 | Y | A | 1.5867 | |
| 6 | C | A | 0.0212 | |
| 7 | R | A | -2.4397 | |
| 8 | K | A | -2.6084 | |
| 9 | G | A | -2.2612 | |
| 10 | H | A | -3.2682 | |
| 11 | C | A | -3.1317 | |
| 12 | K | A | -3.2775 | |
| 13 | R | A | -3.7970 | |
| 14 | G | A | -3.0313 | |
| 15 | E | A | -3.5451 | |
| 16 | R | A | -2.6097 | |
| 17 | V | A | -0.1712 | |
| 18 | R | A | -1.6473 | |
| 19 | G | A | -0.7158 | |
| 20 | T | A | 0.0581 | |
| 21 | C | A | 0.4318 | |
| 22 | G | A | 0.3045 | |
| 23 | I | A | 1.0262 | |
| 24 | R | A | -1.3359 | |
| 25 | F | A | -0.5758 | |
| 26 | L | A | 0.0000 | |
| 27 | Y | A | -0.7302 | |
| 28 | C | A | 0.0000 | |
| 29 | C | A | -0.8478 | |
| 30 | P | A | -2.1894 | |
| 31 | R | A | -2.7491 | |
| 32 | R | A | -2.6620 |