Chain sequence(s) |
A: DVVMTQTPLSLSVTPGEPASISCRSTQSLLDGVNPSFDWYVQKPGQSPQLLIHRGFYRASGVPDRFSGSGSGTDFTLRISRVEAEDVGVYYCMQRIEFPLTFGGGTKVEIK
B: DVVMTQTPLSLSVTPGEPASISCRSTQDSDGVNPSFDWYVQKPGQSPQLLIHRGFYRASGVPDRFSGSGSGTDFTLRISRVEAEDVGVYYCMQRIEFPLTFGGGTKVEIK input PDB |
Selected Chain(s) | A,B |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28) [INFO] Main: Simulation completed successfully. (00:02:30) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | A | -1.7563 | |
2 | V | A | 0.1692 | |
3 | V | A | 1.8272 | |
4 | M | A | 0.4283 | |
5 | T | A | -0.0434 | |
6 | Q | A | 0.0000 | |
7 | T | A | -0.0913 | |
8 | P | A | 0.1952 | |
9 | L | A | 1.4956 | |
10 | S | A | -0.0086 | |
11 | L | A | 0.1798 | |
12 | S | A | -0.1280 | |
13 | V | A | 0.0000 | |
14 | T | A | -0.0932 | |
15 | P | A | -0.2975 | |
16 | G | A | -0.7277 | |
17 | E | A | -1.7251 | |
18 | P | A | -0.7789 | |
19 | A | A | 0.0000 | |
20 | S | A | -0.3283 | |
21 | I | A | 0.0000 | |
22 | S | A | -0.0670 | |
23 | C | A | 0.0000 | |
24 | R | A | -1.9266 | |
25 | S | A | 0.0000 | |
26 | T | A | -0.0986 | |
27 | Q | A | -0.1970 | |
27A | S | A | 0.0418 | |
27B | L | A | 1.7931 | |
27C | L | A | 1.5041 | |
27D | D | A | -1.5055 | |
28 | G | A | -0.0296 | |
29 | V | A | 0.0928 | |
30 | N | A | -1.2167 | |
31 | P | A | -0.2497 | |
32 | S | A | -0.0288 | |
33 | F | A | 0.0000 | |
34 | D | A | 0.0000 | |
35 | W | A | 0.0000 | |
36 | Y | A | 0.2983 | |
37 | V | A | 0.0000 | |
38 | Q | A | -0.5532 | |
39 | K | A | -0.5504 | |
40 | P | A | -0.4183 | |
41 | G | A | -0.7367 | |
42 | Q | A | -1.3256 | |
43 | S | A | -0.4755 | |
44 | P | A | -0.4357 | |
45 | Q | A | -0.7479 | |
46 | L | A | 0.2585 | |
47 | L | A | 0.0000 | |
48 | I | A | 0.0000 | |
49 | H | A | -0.7224 | |
50 | R | A | -1.5201 | |
51 | G | A | 0.0000 | |
52 | F | A | 2.1739 | |
53 | Y | A | 1.4632 | |
54 | R | A | -0.8812 | |
55 | A | A | -0.2395 | |
56 | S | A | -0.2973 | |
57 | G | A | -0.5056 | |
58 | V | A | 0.0000 | |
59 | P | A | -0.4540 | |
60 | D | A | -1.8756 | |
61 | R | A | -0.6755 | |
62 | F | A | 0.0000 | |
63 | S | A | -0.1828 | |
64 | G | A | 0.1052 | |
65 | S | A | -0.1324 | |
66 | G | A | -0.2619 | |
67 | S | A | -0.3378 | |
68 | G | A | -0.5075 | |
69 | T | A | -0.2109 | |
70 | D | A | -0.8782 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.0169 | |
73 | L | A | 0.0000 | |
74 | R | A | -1.1888 | |
75 | I | A | 0.0000 | |
76 | S | A | -0.5843 | |
77 | R | A | -2.0909 | |
78 | V | A | 0.0000 | |
79 | E | A | -0.9091 | |
80 | A | A | -0.4777 | |
81 | E | A | -1.8141 | |
82 | D | A | 0.0000 | |
83 | V | A | 0.6061 | |
84 | G | A | 0.0000 | |
85 | V | A | 0.2369 | |
86 | Y | A | 0.0000 | |
87 | Y | A | 0.2671 | |
88 | C | A | 0.0000 | |
89 | M | A | 0.0000 | |
90 | Q | A | 0.0000 | |
91 | R | A | -0.9698 | |
92 | I | A | -0.3292 | |
93 | E | A | -1.7361 | |
94 | F | A | -0.1499 | |
95 | P | A | -0.0490 | |
96 | L | A | 0.8190 | |
97 | T | A | 0.4164 | |
98 | F | A | 1.4248 | |
99 | G | A | 0.1364 | |
100 | G | A | -0.4852 | |
101 | G | A | -0.1134 | |
102 | T | A | 0.0000 | |
103 | K | A | -0.9379 | |
104 | V | A | 0.0000 | |
105 | E | A | -1.5159 | |
106 | I | A | -0.1809 | |
107 | K | A | -1.6220 | |
1 | D | B | -1.7894 | |
2 | V | B | 0.0000 | |
3 | V | B | 1.7728 | |
4 | M | B | 0.0000 | |
5 | T | B | -0.0683 | |
6 | Q | B | 0.0000 | |
7 | T | B | -0.0884 | |
8 | P | B | 0.1957 | |
9 | L | B | 1.4944 | |
10 | S | B | 0.0014 | |
11 | L | B | 0.1866 | |
12 | S | B | -0.3238 | |
13 | V | B | 0.0000 | |
14 | T | B | -0.0990 | |
15 | P | B | -0.2945 | |
16 | G | B | -0.6391 | |
17 | E | B | -1.2542 | |
18 | P | B | -0.6791 | |
19 | A | B | 0.0000 | |
20 | S | B | -0.4425 | |
21 | I | B | 0.0000 | |
22 | S | B | -0.0728 | |
23 | C | B | 0.0000 | |
24 | R | B | -1.7202 | |
25 | S | B | 0.0000 | |
26 | T | B | -0.1469 | |
27 | Q | B | -0.5516 | |
27D | D | B | -1.8280 | |
27E | S | B | -0.8609 | |
27F | D | B | -1.9137 | |
28 | G | B | -0.7369 | |
29 | V | B | 0.0024 | |
30 | N | B | -1.2198 | |
31 | P | B | -0.2631 | |
32 | S | B | 0.0000 | |
33 | F | B | 0.0000 | |
34 | D | B | 0.0000 | |
35 | W | B | 0.0000 | |
36 | Y | B | 0.2617 | |
37 | V | B | 0.0000 | |
38 | Q | B | -0.6103 | |
39 | K | B | -0.6807 | |
40 | P | B | -0.4415 | |
41 | G | B | -0.7334 | |
42 | Q | B | -1.3229 | |
43 | S | B | -0.4758 | |
44 | P | B | -0.5366 | |
45 | Q | B | -1.0030 | |
46 | L | B | 0.2399 | |
47 | L | B | 0.0000 | |
48 | I | B | 0.0000 | |
49 | H | B | -0.5024 | |
50 | R | B | -0.8949 | |
51 | G | B | 0.0000 | |
52 | F | B | 1.9483 | |
53 | Y | B | 1.4050 | |
54 | R | B | -0.9625 | |
55 | A | B | -0.2560 | |
56 | S | B | -0.2979 | |
57 | G | B | -0.5059 | |
58 | V | B | 0.0000 | |
59 | P | B | -0.4709 | |
60 | D | B | -1.8708 | |
61 | R | B | -0.6337 | |
62 | F | B | 0.0000 | |
63 | S | B | -0.1470 | |
64 | G | B | 0.0750 | |
65 | S | B | -0.2109 | |
66 | G | B | -0.3060 | |
67 | S | B | -0.3444 | |
68 | G | B | -0.5096 | |
69 | T | B | -0.3554 | |
70 | D | B | -1.5728 | |
71 | F | B | 0.0000 | |
72 | T | B | -0.0205 | |
73 | L | B | 0.0000 | |
74 | R | B | -1.8705 | |
75 | I | B | 0.0000 | |
76 | S | B | -0.5816 | |
77 | R | B | -2.0396 | |
78 | V | B | 0.0000 | |
79 | E | B | -1.0532 | |
80 | A | B | -0.4735 | |
81 | E | B | -1.8092 | |
82 | D | B | 0.0000 | |
83 | V | B | 0.3544 | |
84 | G | B | 0.0000 | |
85 | V | B | 0.2009 | |
86 | Y | B | 0.0000 | |
87 | Y | B | 0.2106 | |
88 | C | B | 0.0000 | |
89 | M | B | 0.0000 | |
90 | Q | B | 0.0000 | |
91 | R | B | -0.3986 | |
92 | I | B | 0.0000 | |
93 | E | B | -0.8720 | |
94 | F | B | 0.1960 | |
95 | P | B | -0.0212 | |
96 | L | B | 0.7874 | |
97 | T | B | 0.3872 | |
98 | F | B | 1.3457 | |
99 | G | B | 0.0000 | |
100 | G | B | -0.3310 | |
101 | G | B | -0.1670 | |
102 | T | B | 0.0000 | |
103 | K | B | -1.0194 | |
104 | V | B | 0.0000 | |
105 | E | B | -1.3610 | |
106 | I | B | 0.2435 | |
107 | K | B | -1.5450 |