| Chain sequence(s) |
A: ECVPENGHCRDWYDECCEGFYCSCRQPPKCICRNNN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.4787 | |
| 2 | C | A | -1.1817 | |
| 3 | V | A | -1.2305 | |
| 4 | P | A | -1.9046 | |
| 5 | E | A | -2.7178 | |
| 6 | N | A | -2.4915 | |
| 7 | G | A | -1.6019 | |
| 8 | H | A | -2.0907 | |
| 9 | C | A | 0.0000 | |
| 10 | R | A | -2.2859 | |
| 11 | D | A | -1.6163 | |
| 12 | W | A | 0.1744 | |
| 13 | Y | A | 0.3788 | |
| 14 | D | A | -1.1989 | |
| 15 | E | A | -2.0371 | |
| 16 | C | A | -1.7811 | |
| 17 | C | A | -1.5102 | |
| 18 | E | A | -2.0090 | |
| 19 | G | A | -1.8281 | |
| 20 | F | A | -1.7035 | |
| 21 | Y | A | -0.7569 | |
| 22 | C | A | -1.6276 | |
| 23 | S | A | -1.3102 | |
| 24 | C | A | -2.1641 | |
| 25 | R | A | -2.8207 | |
| 26 | Q | A | -2.7784 | |
| 27 | P | A | -2.2322 | |
| 28 | P | A | -1.9496 | |
| 29 | K | A | -2.8785 | |
| 30 | C | A | 0.0000 | |
| 31 | I | A | -1.7244 | |
| 32 | C | A | 0.0000 | |
| 33 | R | A | -2.3131 | |
| 34 | N | A | -3.0288 | |
| 35 | N | A | -2.6733 | |
| 36 | N | A | -2.3139 |