| Chain sequence(s) |
A: SKGHKGH
C: SKGHKGH B: SKGHKGH E: SKGHKGH D: SKGHKGH G: SKGHKGH F: SKGHKGH I: SKGHKGH H: SKGHKGH K: SKGHKGH J: SKGHKGH L: SKGHKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:57)
[INFO] Main: Simulation completed successfully. (00:04:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.6127 | |
| 2 | K | A | -2.7875 | |
| 3 | G | A | -2.9112 | |
| 4 | H | A | -2.8587 | |
| 5 | K | A | -3.4841 | |
| 6 | G | A | -2.3390 | |
| 7 | H | A | -1.9914 | |
| 1 | S | B | -2.2753 | |
| 2 | K | B | -3.3662 | |
| 3 | G | B | -3.2612 | |
| 4 | H | B | -3.7646 | |
| 5 | K | B | -3.3777 | |
| 6 | G | B | -2.3015 | |
| 7 | H | B | -1.9271 | |
| 1 | S | C | -2.5854 | |
| 2 | K | C | -3.0727 | |
| 3 | G | C | -2.8335 | |
| 4 | H | C | -3.4041 | |
| 5 | K | C | -3.7140 | |
| 6 | G | C | -3.3138 | |
| 7 | H | C | -2.6755 | |
| 1 | S | D | 0.0000 | |
| 2 | K | D | -4.3012 | |
| 3 | G | D | -3.6868 | |
| 4 | H | D | -3.6445 | |
| 5 | K | D | -3.1448 | |
| 6 | G | D | -2.5664 | |
| 7 | H | D | -1.8327 | |
| 1 | S | E | -2.9393 | |
| 2 | K | E | -4.0432 | |
| 3 | G | E | -4.0900 | |
| 4 | H | E | -3.9752 | |
| 5 | K | E | -3.6408 | |
| 6 | G | E | -2.9232 | |
| 7 | H | E | -2.8497 | |
| 1 | S | F | -1.7628 | |
| 2 | K | F | -3.7726 | |
| 3 | G | F | -2.8737 | |
| 4 | H | F | -3.2497 | |
| 5 | K | F | -3.5586 | |
| 6 | G | F | -3.5841 | |
| 7 | H | F | -3.4350 | |
| 1 | S | G | -1.8507 | |
| 2 | K | G | -3.4167 | |
| 3 | G | G | -3.5057 | |
| 4 | H | G | -3.4783 | |
| 5 | K | G | -3.0271 | |
| 6 | G | G | -2.7248 | |
| 7 | H | G | -1.9437 | |
| 1 | S | H | -2.1619 | |
| 2 | K | H | -3.5280 | |
| 3 | G | H | -3.5258 | |
| 4 | H | H | -3.4793 | |
| 5 | K | H | -3.9728 | |
| 6 | G | H | -3.4887 | |
| 7 | H | H | -3.6877 | |
| 1 | S | I | -1.2253 | |
| 2 | K | I | -2.5280 | |
| 3 | G | I | -2.3252 | |
| 4 | H | I | -2.8161 | |
| 5 | K | I | -3.4517 | |
| 6 | G | I | -3.0899 | |
| 7 | H | I | -3.6756 | |
| 1 | S | J | -3.0651 | |
| 2 | K | J | -4.3822 | |
| 3 | G | J | -3.7164 | |
| 4 | H | J | -3.3243 | |
| 5 | K | J | -3.3075 | |
| 6 | G | J | -2.0531 | |
| 7 | H | J | -1.7453 | |
| 1 | S | K | -2.5616 | |
| 2 | K | K | -3.2147 | |
| 3 | G | K | -2.8949 | |
| 4 | H | K | -3.1539 | |
| 5 | K | K | -3.7494 | |
| 6 | G | K | -3.1827 | |
| 7 | H | K | -2.8025 | |
| 1 | S | L | -2.2939 | |
| 2 | K | L | -3.5531 | |
| 3 | G | L | -3.2264 | |
| 4 | H | L | -3.4256 | |
| 5 | K | L | -4.5836 | |
| 6 | G | L | -3.5552 | |
| 7 | H | L | -2.4454 |